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Table 2 Analysis of SH3 domain

From: H2r: Identification of evolutionary important residues by means of an entropy based analysis of multiple sequence alignments

#

Conn(k)

Max U(k, l)

115

13 (1)

0.25 (3)

114

7 (2)

0.28 (1)

97

6 (3)

0.25 (3)

85

5 (4)

0.28 (1)

86

5 (4)

0.23 (10)

100

 

0.26 (2)

99

 

0.26 (2)

113

 

0.25 (4)

121

 

0.25 (4)

103

 

0.24 (5)

89

 

0.24 (5)

130

 

0.24 (7)

141

 

0.23 (10)

  1. The MSA constituting PF00018 was analysed by using H2r. Residue numbers resulting from a projection of the MSA onto pdb structure 1SHF are listed in the first column. The second column lists conn(k)-values, the third one the maximal U(k, l)-values. The rank of each prediction is given in brackets.
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BMC Bioinformatics

ISSN: 1471-2105

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