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Table 1 Prediction in biological assessment. Summary of the light and heavy chain and sex prediction obtained for 47 new patients.

From: A new method for class prediction based on signed-rank algorithms applied to Affymetrix® microarray experiments

Patient

Sex

Light chain

Heavy chain

 

NS errors

PAM score

File

NS errors

PAM score

File

NS errors

PAM score

File

 

F

M

P

F

M

P

 

κ

λ

P

κ

λ

P

 

A

G

P

A

G

P

 

E4006

11

0

M

0.000

1.000

M

M

9

3

λ

0.000

1.000

λ

λ

9

1

G

1.000

0.000

A

A

E4020

0

10

F

0.168

0.832

M

F

11

1

λ

0.000

1.000

λ

λ

23

0

G

0.000

1.000

G

G

E4038

0

10

F

1.000

0.000

F

F

0

64

κ

1.000

0.000

κ

κ

Light chain myeloma

E4049

0

10

F

0.000

1.000

M

F

0

52

κ

1.000

0.000

κ

κ

Light chain myeloma

E4050

11

10

MY-

0.000

1.000

MY-

MY-

1

50

κ

1.000

0.000

κ

κ

15

0

G

0.000

1.000

G

G

E4054

11

0

M

0.000

1.000

M

M

0

48

κ

0.903

0.097

κ

κ

41*

61*

A

0.077

0.923

G

A

E4055

11

0

M

0.000

1.000

M

M

23

0

λ

0.000

1.000

λ

λ

56

1

G

0.000

1.000

G

G

E4056

0

10

F

1.000

0.000

F

F

0

55

κ

1.000

0.000

κ

κ

1

2

A

1.000

0.000

A

A

E4057

11

0

M

0.000

1.000

M

M

7

3

λ

0.008

0.992

λ

λ

29

0

G

0.995

0.005

A

G

E4060

11

0

M

0.000

1.000

M

M

0

35

κ

1.000

0.000

κ

κ

48

0

G

0.000

1.000

G

G

E4067

11

0

M

0.000

1.000

M

M

0

50

κ

1.000

0.000

κ

κ

57

0

G

0.000

1.000

G

G

E4071

11

0

M

0.000

1.000

M

M

0

51

κ

1.000

0.000

κ

κ

59

0

G

0.000

1.000

G

G

E4073

0

10

MY-

0.000

1.000

MY-

MY-

0

58

κ

1.000

0.000

κ

κ

48

0

G

0.000

1.000

G

G

E4078

0

10

F

0.000

1.000

M

F

8

1

λ

0.000

1.000

λ

λ

IgD myeloma

E4085

0

10

F

0.001

0.999

M

F

15

2

λ

0.003

0.997

λ

λ

Light chain myeloma

E4094

11

0

M

0.000

1.000

M

M

0

51

κ

0.770

0.230

κ

κ

0

17

A

0.254

0.746

G

A

E4105

0

10

F

0.000

1.000

M

F

6

3

λ

0.000

1.000

λ

λ

Light chain myeloma

E4106

0

10

F

0.996

0.004

F

F

0

42

κ

0.997

0.003

κ

κ

0

5

A

0.065

0.935

G

A

E4121

0

10

F

0.000

1.000

M

F

27

0

λ

0.000

1.000

λ

λ

27

0

G

0.000

1.000

G

G

E4122

11

10

MY-

0.000

1.000

MY-

MY-

0

59

κ

0.999

0.001

κ

κ

0

16

A

1.000

0.000

A

A

E4126

11

0

M

0.000

1.000

M

M

0

50

κ

0.983

0.017

κ

κ

0

17

A

1.000

0.000

A

A

E5007

0

10

F

0.000

1.000

M

F

0

32

κ

1.000

0.000

κ

κ

2

3

A

0.291

0.709

G

A

E5024

11

0

M

0.000

1.000

M

M

0

51

κ

0.999

0.001

κ

κ

IgD myeloma

E5029

0

10

F

0.000

1.000

M

F

28

0

λ

0.000

1.000

λ

λ

Light chain myeloma

E5035

0

10

F

1.000

0.000

F

F

0

56

κ

0.994

0.006

κ

κ

52

0

G

0.000

1.000

G

G

E5038

11

10

MY-

0.000

1.000

MY-

MY-

0

59

κ

0.974

0.026

κ

κ

Light chain myeloma

E5040

0

10

F

0.001

0.999

M

F

1

38

κ

0.998

0.002

κ

κ

96*

43*

G

0.000

1.000

G

G

E5043

0

10

F

0.001

0.999

M

F

0

48

κ

0.994

0.006

κ

κ

45

0

G

0.000

1.000

G

G

E5046

0

10

F

0.000

1.000

M

F

28

0

λ

0.000

1.000

λ

λ

0

19

A

1.000

0.000

A

A

E5048

11

0

M

0.000

1.000

M

M

25

0

λ

0.000

1.000

λ

λ

17

0

G

0.000

1.000

G

G

E5049

0

10

F

0.001

0.999

M

F

1

48

κ

0.996

0.004

κ

κ

52

0

G

0.000

1.000

G

G

E5065

11

0

M

0.000

1.000

M

M

25

0

λ

0.001

0.999

λ

λ

Light chain myeloma

E5066

0

10

F

0.000

1.000

M

F

28

0

λ

0.008

0.992

λ

λ

Light chain myeloma

E5068

0

10

F

0.000

1.000

M

F

16

0

λ

0.122

0.878

λ

λ

0

17

A

0.875

0.125

A

A

E5069

0

10

F

0.001

0.999

M

F

0

62

κ

0.695

0.305

κ

κ

104*

44*

G

0.000

1.000

G

G

E5081

0

10

F

0.000

1.000

M

F

26

0

λ

0.212

0.788

λ

λ

33

0

G

0.000

1.000

G

G

E5084

11

10

MY-

0.000

1.000

MY-

MY-

23

0

λ

0.088

0.912

λ

λ

0

18

A

0.019

0.981

G

A

E5087

0

10

F

1.000

0.000

F

F

0

61

κ

0.912

0.088

κ

κ

55

0

G

0.000

1.000

G

G

E5093

0

10

F

0.999

0.001

F

F

1

35

κ

0.978

0.022

κ

κ

43

0

G

0.000

1.000

G

G

E5103

0

10

F

1.000

0.000

F

F

1

39

κ

0.997

0.003

κ

κ

47

0

G

0.000

1.000

G

G

E5104

11

0

M

0.000

1.000

M

M

0

51

κ

0.927

0.073

κ

κ

Light chain myeloma

E5106

0

10

F

0.002

0.998

M

F

0

58

κ

0.873

0.127

κ

κ

0

7

A

0.552

0.448

A

A

E5125

11

0

M

0.000

1.000

M

M

3

13

κ

0.841

0.159

κ

κ

5

1

G

0.000

1.000

G

G

E5126

11

10

MY-

0.000

1.000

MY-

MY-

0

38

κ

0.236

0.764

λ

κ

9

0

G

0.000

1.000

G

G

E5136

0

10

F

1.000

0.000

F

F

0

59

κ

0.391

0.609

λ

κ

Light chain myeloma

E5138

11

0

M

0.000

1.000

M

M

17

1

λ

0.000

1.000

λ

λ

Light chain myeloma

E5139

0

10

F

0.003

0.997

M

F

11

1

λ

0.000

1.000

λ

λ

21

0

G

0.000

1.000

G

G

E6002

11

0

M

0.000

1.000

M

M

0

46

κ

0.958

0.042

κ

κ

Light chain myeloma

E6003

11

0

M

0.000

1.000

M

M

0

53

κ

0.975

0.025

κ

κ

44*

65*

A

0.855

0.145

A

A

E6008

11

0

M

0.000

1.000

M

M

0

26

κ

0.891

0.109

κ

κ

29

1

G

0.000

1.000

G

G

E6011

11

0

M

0.000

1.000

M

M

0

56

κ

0.975

0.025

κ

κ

49

0

G

0.000

1.000

G

G

E6020

11

10

MY-

0.000

1.000

M

F

16

0

λ

0.000

1.000

λ

λ

6

0

G

0.000

1.000

G

G

E6022

0

10

F

1.000

0.000

F

F

0

39

κ

1.000

0.000

κ

κ

0

4

A

1.000

0.000

A

A

E6024

11

0

M

0.000

1.000

M

M

10

1

λ

0.000

1.000

λ

λ

IgD myeloma

E6025

11

0

M

0.000

1.000

M

M

4

13

κ

0.003

0.997

λ

κ

30

1

G

1.000

0.000

A

G

E6026

0

10

F

0.001

0.999

M

F

0

27

κ

1.000

0.000

κ

κ

36

0

G

0.000

1.000

G

G

E6049

11

0

M

0.000

1.000

M

M

0

12

κ

1.000

0.000

κ

κ

2

4

A

0.008

0.992

G

A

E6054

11

0

M

0.000

1.000

M

M

0

40

κ

1.000

0.000

κ

κ

3

8

A

0.002

0.998

G

A

E6056

11

0

M

0.000

1.000

M

M

0

37

κ

1.000

0.000

κ

κ

0

6

A

1.000

0.000

A

A

E6063

11

10

MY-

0.000

1.000

MY-

MY-

1

13

κ

0.999

0.001

κ

κ

8

1

G

0.000

1.000

G

G

E6074

11

0

M

0.000

1.000

M

M

0

22

κ

1.000

0.000

κ

κ

Light chain myeloma

E6077

11

0

M

0.000

1.000

M

M

1

31

κ

1.000

0.000

κ

κ

51

0

G

0.000

1.000

G

G

E6087

0

10

F

0.002

0.998

M

F

15

1

λ

0.000

1.000

λ

λ

0

8

A

1.000

0.000

A

A

E6092

0

10

F

1.000

0.000

F

F

17

1

λ

0.000

1.000

λ

λ

67*

50*

G

0.000

1.000

G

G

E6100

0

10

F

1.000

0.000

F

F

1

25

κ

0.477

0.523

λ

κ

70*

44*

G

0.000

1.000

G

G

E6108

0

10

F

1.000

0.000

F

F

0

46

κ

1.000

0.000

κ

κ

Light chain myeloma

E6117

0

10

F

0.009

0.991

M

F

13

1

λ

0.001

0.999

λ

λ

Light chain myeloma

E6120

11

0

M

0.000

1.000

M

M

16

2

λ

0.000

1.000

λ

λ

0

2

A

1.000

0.000

A

A

  1. Abbreviations:
  2. F: female, M: male
  3. P: predicted
  4. MY-: male with Y chromosome deletion
  5. A: IgA, G: IgG
  6. *: When the number of non significant comparisons is identical in both classes for the call predictor at a given precision of the Bonferroni-corrected χ2 sample-to-sample comparisons, the P-value is increased by one log unit, adding intra-class errors to interclass ones, but still leading to a correct classification.