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Table 3 Results over 161 pair from Skolnick's dataset. The error is measured with respect to the optimum value.

From: A simple and fast heuristic for protein structure comparison

   

Error(%)

 

Version

N

Avg

SD

Median

Total

MSVNS1

161 (100%)

7,3950

7,44111

5,5556

 

MSVNS2

161 (100%)

1,8235

2,50117

0,7375

 

MSVNS3

161 (100%)

1,6744

2,39488

0,4399

Optimally Solved

MSVNS1

42 (26,09%)

0,0000

0,00000

0,0000

 

MSVNS2

62 (38,51%)

0,0000

0,00000

0,0000

 

MSVNS3

68 (42,24%)

0,0000

0,00000

0,0000

Non-Optimally Solved

MSVNS1

119 (73,91%)

10,005

6,98169

9,5092

 

MSVNS2

99 (61,49%)

2,9655

2,60624

2,2124

 

MSVNS3

93 (57,76%)

2,8987

2,52732

2,3910