Skip to main content

Table 5 Mean ROC values and execution time (in seconds) of various methods on the von Mering Data Set.

From: Adaptive diffusion kernel learning from biological networks for protein function prediction

Algorithm

Mean ROC

Time

uBaseline

0.8061

----

rBaseline

0.7832

----

eBaseline

0.7945

----

DKL

0.8339

3441.13

DKLKL

0.8340

7445.67

DKL KL u MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeeiraqKaee4saSKaeeitaW0aa0baaSqaaiabbUealjabbYeambqaaiabbwha1baaaaa@32FA@

0.7968

35384.84

mDKL

0.8345

54.64

mDKLKL

0.8345

67.52

mDKL KL u MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeeyBa0MaeeiraqKaee4saSKaeeitaW0aa0baaSqaaiabbUealjabbYeambqaaiabbwha1baaaaa@345B@

0.8129

151.49

Neighbor Counting

0.7076

----

FS-Weighted Averaging

0.7544

----

SM1

----

----