Skip to main content

Table 3 PDB set annotation performance with matches having ≤20% sequence identity

From: Prediction of enzyme function based on 3D templates of evolutionarily important amino acids

 

ETA

BLAST

PSI-BLAST

BLAST + ETA

PSI-BLAST + ETA

PEAS (voting)

PEAS (scoring)

Matches

55

119

191

13

25

9

9

True matches

18

73

113

9

17

6

6

Proteins

49

49

49

49

49

49

49

With matches

24

26

33

11

16

5

5

With at least one true match

10

16

20

7

10

3

3

With vote winners

13

17

25

7

12

5

5

With correct winners

8

15

19

7

10

3

2

Prediction accuracy

62%

88%

76%

100%

83%

60%

40%

Prediction availability

27%

35%

51%

14%

24%

10%

10%