Table 3 The seventy top-scoring domain pairs with pw-score at most 0.01.
From: Interrogating domain-domain interactions with parsimony based approaches
ORIG domA | ORIG domB | LP_score | pw_score | iPFAM | Witns |
|---|---|---|---|---|---|
7tm_1 | IL8 | 1 | 0 | 0 | 80 |
AAA | AAA | 1 | 0 | 1 | 36 |
AAA | PCI | 1 | 0 | 0 | 18 |
Ank | RHD | 1 | 0 | 1 | 0 |
Cpn60_TCP1 | WD40 | 1 | 0 | 0 | 50 |
Cyclin_N | Pkinase | 1 | 0 | 1 | 24 |
LSM | LSM | 1 | 0 | 1 | 76 |
Pkinase | zf-C2H2 | 1 | 0 | 0 | 22 |
Pkinase | Pkinase | 1 | 0 | 1 | 60 |
Pkinase | WD40 | 1 | 0 | 0 | 30 |
Proteasome | Proteasome | 1 | 0 | 1 | 36 |
RNase_PH | RNase_PH | 1 | 0 | 1 | 0 |
RNase_PH | RNase_PH_C | 1 | 0 | 1 | 0 |
RRM_1 | RRM_1 | 1 | 0 | 1 | 70 |
RRM_1 | WD40 | 1 | 0 | 0 | 21 |
RRM_1 | zf-C2H2 | 1 | 0 | 0 | 23 |
WD40 | WD40 | 1 | 0 | 1 | 38 |
zf-C2H2 | zf-C2H2 | 1 | 0 | 1 | 106 |
UQ_con | zf-C3HC4 | 1 | 0.00001 | 1 | 17 |
Pkinase | RRM_1 | 1 | 0.00002 | 0 | 16 |
TNF | TNFR_c6 | 1 | 0.00002 | 1 | 16 |
GTP_CDC | GTP_CDC | 1 | 0.00003 | 0 | 15 |
Homeobox | Pkinase | 1 | 0.00003 | 0 | 15 |
GDI | Ras | 1 | 0.00006 | 1 | 14 |
PCI | PCI | 1 | 0.00006 | 0 | 14 |
TPR | zf-C2H2 | 1 | 0.00006 | 0 | 14 |
LSM | WD40 | 1 | 0.00012 | 0 | 13 |
Metallophos | Proteasome | 1 | 0.00012 | 0 | 13 |
AAA | WD40 | 1 | 0.00024 | 0 | 12 |
HLH | HLH | 1 | 0.00024 | 1 | 12 |
Ras | Yip1 | 1 | 0.00024 | 0 | 12 |
WD40 | zf-C2H2 | 1 | 0.00024 | 0 | 12 |
Hrf1 | Ras | 1 | 0.00049 | 0 | 11 |
Metallophos | efhand | 1 | 0.00049 | 1 | 11 |
TPR | WD40 | 1 | 0.00049 | 0 | 11 |
Brix | WD40 | 1 | 0.00098 | 0 | 10 |
Homeobox | Homeobox | 1 | 0.00098 | 1 | 10 |
Homeobox | zf-C2H2 | 1 | 0.00098 | 0 | 10 |
HSP70 | Pkinase | 1 | 0.00098 | 0 | 10 |
KH_1 | WD40 | 1 | 0.00098 | 0 | 10 |
LSM | RRM_1 | 1 | 0.00098 | 0 | 10 |
LSM | Nop | 1 | 0.00098 | 0 | 10 |
Metallophos | Pkinase | 1 | 0.00098 | 0 | 10 |
PCI | Proteasome | 1 | 0.00098 | 0 | 10 |
AAA | TPR | 1 | 0.00195 | 0 | 9 |
Ank | Pkinase | 1 | 0.00195 | 1 | 9 |
Chitin_bind_4 | Chitin_bind_4 | 1 | 0.00195 | 0 | 9 |
E2F_TDP | SUPRDOM8 | 1 | 0.00195 | 0 | 9 |
HSP70 | WD40 | 1 | 0.00195 | 0 | 9 |
KH_1 | RRM_1 | 1 | 0.00195 | 0 | 9 |
LSM | zf-C2H2 | 1 | 0.00195 | 0 | 9 |
PH | Pkinase | 1 | 0.00195 | 0 | 9 |
Pkinase | Rad50_zn_hook | 1 | 0.00195 | 0 | 9 |
Pkinase | efhand | 1 | 0.00195 | 0 | 9 |
Pkinase | TPR | 1 | 0.00195 | 0 | 9 |
Histone | WD40 | 1 | 0.00391 | 0 | 8 |
Pkinase | Ras | 1 | 0.00391 | 0 | 8 |
zf-C3HC4 | zf-C3HC4 | 1 | 0.00391 | 0 | 8 |
HATPase_c | HATPase_c | 1 | 0.005 | 1 | 1 |
SNARE | SNARE | 1 | 0.005 | 1 | 1 |
efhand | efhand | 1 | 0.00781 | 1 | 7 |
Homeobox | WD40 | 1 | 0.00781 | 0 | 7 |
PP2C | Pkinase | 1 | 0.00781 | 0 | 7 |
RRM_1 | TPR | 1 | 0.00781 | 0 | 7 |
Zn_clus | Zn_clus | 1 | 0.00781 | 1 | 7 |
HSP90 | Pkinase | 0.999 | 0 | 0 | 0 |
RHD | RHD | 0.999 | 0 | 1 | 0 |
RHD | TIG | 0.999 | 0 | 1 | 0 |
TIG | TIG | 0.999 | 0 | 1 | 0 |
KE2 | Prefoldin | 0.999 | 0.00098 | 1 | 10 |