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Table 1 Cancer gene enrichment of proteins according to their Cancer Linker Degree. The enrichment of cancer genes is shown for proteins with CLD ≥ 0, CLD ≥ 1 and CLD ≥ 10. The p-value of the difference between the whole data set (proteins with CLD ≥ 0) and proteins with CLD ≥ 1 and CLD ≥ 10 was calculated using the Fisher's exact test for count data (F) and the Wilcoxon signed rank test (W) on 1000 random samples.

From: Predicting cancer involvement of genes from heterogeneous data

 

proteins CLD ≥ 0

proteins CLD ≥ 1

p-value CLD ≥ 0 vs. CLD ≥ 1

proteins CLD ≥ 10

p-value CLD ≥ 0 vs. CLD ≥ 10

p-value CLD ≥ 1 vs. CLD ≥ 10

% of cancer genes

10%

15%

< 2.2 × 10-16 (F)

< 2.2 × 10-16 (W)

48%

< 2.2 × 10-16 (F)

< 2.2 × 10-16 (W)

< 2.2 × 10-16 (F)