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Table 1 Sensitivity and Specificity of gene identification using the incremental clustering method.

From: Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering

Genome

Kingdom

%GC

%Sn

%Sp

Acaryochloris marina MBIC11017

B

47.2

70

96.4

Acidobacteria bacterium Ellin345

B

58.3

68.3

95.9

Acidiphilium cryptum JF-5

B

67.9

80.9

84

Acinetobacter baumannii ATCC 17978

B

38.9

80.6

95.5

Alcanivorax borkumensis SK2

B

54.7

84.7

97.7

Bacteroides vulgatus ATCC 8482

B

42.2

73.3

97

Burkholderia thailandensis E264

B

67.2

81.1

87.5

Caldivirga maquilingensis IC-167

A

43

67.3

97.8

Candidatus Methanoregula boonei 6A8

A

54.5

67.1

95.6

Candidatus Pelagibacter ubique HTCC1062

B

29.6

98.1

98

Fervidobacterium nodosum Rt17-B1

B

34.9

76.3

97.1

Francisella tularensis subsp. Holarctica

B

32.1

83.2

87.7

Hyperthermus butylicus DSM 5456

A

53.7

61.3

94

Lactobacillus salivarius UCC118

B

32.9

78.4

93

Methanococcus aeolicus Nankai-3

A

30

73.8

97.8

Staphylothermus marinus F1

A

35.7

63.8

96.7

Thermofilum pendens Hrk 5

A

57.6

63.9

97.4

Average

  

74.8

94.7

  1. A-Archaea, B-Bacteria, Sn-Sensitivity, Sp-Specificity.