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Figure 1 | BMC Bioinformatics

Figure 1

From: Significance analysis of microarray for relative quantitation of LC/MS data in proteomics

Figure 1

CV summary statistics. Boxplots displaying the summary statistics of the coefficient of variance (CV) of protein relative abundances for the pH5 culture triplicates (pH5A, pH5B, and pH5C), the pH7 culture triplicates (pH7A, pH7B, and pH7C), and the in silico pooled replicates (pH5p and pH7p). A boxplot summarizes the minimum, 25 percentile, 50 percentile, 75 percentile, and maximum CV's of a sample. a) Boxplots are plotted for the 174 proteins quantified between pH5p and pH7p. These 174 proteins include all those proteins quantified in pH5A(159), pH5B(159), pH5C(161), pH7A(131), pH7B(124), and pH7C(134). The numbers in parenthesis indicate the number of protein in a sample. b) Boxplots are plotted for the 121 proteins quantified in at least 5 of the 6 replicates of the pH5 and pH7 culture samples. The diamond dots indicate the mean CV's.

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