From: Improving protein function prediction methods with integrated literature data
Mutual Information Measure (MUT) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Fraction | Yeast | MIPS | MF | BP | Worm | MF | BP | Fly | MF | BP |
> 0.0 | 8621 | 80 | 41 | 71 | 21847 | 76 | 57 | 17508 | 47 | 70 |
≥0.1 | 8615 | 80 | 41 | 71 | 21711 | 77 | 57 | 17422 | 47 | 70 |
≥0.2 | 8554 | 80 | 41 | 71 | 21177 | 78 | 58 | 16753 | 47 | 71 |
≥0.3 | 8210 | 80 | 41 | 71 | 20209 | 80 | 60 | 14494 | 49 | 72 |
≥0.4 | 7216 | 80 | 43 | 72 | 18811 | 83 | 63 | 10625 | 53 | 76 |
≥0.5 | 5592 | 82 | 46 | 73 | 17813 | 85 | 64 | 7021 | 56 | 76 |
≥0.6 | 3605 | 82 | 51 | 74 | 15857 | 91 | 67 | 4112 | 63 | 74 |
≥0.7 | 1856 | 82 | 56 | 74 | 12770 | 91 | 61 | 1965 | 59 | 68 |
≥0.8 | 700 | 77 | 54 | 72 | 10924 | 94 | 61 | 1002 | 56 | 63 |
≥0.9 | 159 | 65 | 45 | 75 | 6360 | 94 | 91 | 308 | 38 | 40 |
Hypergeometric Measure (HYG) | ||||||||||
Fraction | Yeast | MIPS | MF | BP | Worm | MF | BP | Fly | MF | BP |
>0.0 | 8621 | 80 | 43 | 73 | 21847 | 76 | 57 | 17508 | 47 | 70 |
≥0.1 | 8614 | 80 | 43 | 73 | 21739 | 77 | 57 | 17125 | 47 | 71 |
≥0.2 | 8607 | 80 | 43 | 73 | 21680 | 77 | 57 | 17044 | 47 | 71 |
≥0.3 | 8600 | 80 | 43 | 73 | 21671 | 77 | 57 | 16907 | 47 | 71 |
≥0.4 | 8591 | 80 | 43 | 73 | 21397 | 78 | 58 | 16719 | 47 | 71 |
≥0.5 | 8572 | 80 | 43 | 73 | 21202 | 78 | 58 | 16575 | 48 | 71 |
≥0.6 | 8557 | 80 | 43 | 73 | 21183 | 78 | 58 | 16360 | 48 | 71 |
≥0.7 | 8532 | 80 | 44 | 73 | 21159 | 78 | 58 | 16060 | 48 | 71 |
≥0.8 | 8466 | 80 | 44 | 73 | 20650 | 79 | 59 | 15665 | 48 | 71 |
≥0.9 | 8368 | 80 | 44 | 73 | 20386 | 80 | 60 | 14764 | 49 | 72 |
Asymmetric Co-occurrence Fraction Measure (ACF) | ||||||||||
Fraction | Yeast | MIPS | MF | BP | Worm | MF | BP | Fly | MF | BP |
>0.0 | 8621 | 80 | 41 | 71 | 21847 | 76 | 57 | 17508 | 47 | 70 |
≥0.1 | 6220 | 82 | 45 | 73 | 20063 | 80 | 60 | 9610 | 56 | 75 |
≥0.2 | 4241 | 82 | 49 | 74 | 17836 | 84 | 63 | 6786 | 58 | 76 |
≥0.3 | 2947 | 82 | 54 | 76 | 17353 | 86 | 63 | 5078 | 61 | 76 |
≥0.4 | 2283 | 82 | 56 | 76 | 17023 | 87 | 64 | 4178 | 64 | 77 |
≥0.5 | 1745 | 80 | 55 | 74 | 16875 | 87 | 63 | 3589 | 66 | 77 |
≥0.6 | 1195 | 78 | 55 | 73 | 16574 | 88 | 64 | 2922 | 68 | 76 |
≥0.7 | 713 | 78 | 56 | 72 | 16082 | 88 | 64 | 2494 | 70 | 76 |
≥0.8 | 536 | 74 | 52 | 69 | 15938 | 89 | 63 | 2277 | 71 | 77 |
≥0.9 | 390 | 68 | 47 | 65 | 15821 | 89 | 64 | 2031 | 72 | 75 |