From: A simplified approach to disulfide connectivity prediction from protein sequences
Method | PDBselect | SPX- | PDB4136 | ||||||
---|---|---|---|---|---|---|---|---|---|
Q c | P c | R c | Q c | P c | R c | Q c | P c | R c | |
APTK (PSSM) | 88.8 | 83.8 | 87.7 | 86.1 | 79.0 | 82.8 | 88.2 | 84.0 | 82.5 |
APTK (profiles) | 87.7 | 83.1 | 85.1 | 85.3 | 78.6 | 80.5 | 89.7 | 81.0 | 88.5 |
DISULFIND (PSSM) | 88.3 | 85.0 | 84.3 | 85.3 | 82.6 | 74.1 | 88.0 | 79.1 | 85.5 |
DISULFIND (profiles) | 88.6 | 87.4 | 82.1 | 86.5 | 83.0 | 77.5 | 89.4 | 81.2 | 87.4 |
D-simple (PSSM) | 82.2 | 77.0 | 76.4 | 81.3 | 74.5 | 71.5 | 83.0 | 79.5 | 69.3 |
D-simple (profiles) | 81.5 | 76.0 | 75.3 | 81.1 | 74.3 | 71.1 | 83.0 | 77.1 | 73.4 |
APTK + DISULFIND | 89.9 | 87.8 | 85.5 | 87.0 | 82.6 | 80.2 | 90.3 | 82.1 | 89.2 |
multiple SVM + CSS [14] | - | - | - | - | - | - | 90 | 91 | 77 |