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Table 3 The experimental results of GA-PSO with RNN.

From: Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data

GA generations

Average RMSE

Minimum RMSE

100

1.27

0.78

200

0.84

0.40

400

0.62

0.12

600

0.35

0.077

800

0.31

0.075

  1. The average and least root mean square errors (RMSEs) obtained between the output of RNN and the measured expression profile for the gene clusters are shown as the number of GA generation is varied from 100 to 800.
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BMC Bioinformatics

ISSN: 1471-2105

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