Skip to main content

Table 10 Annotations of cellular component ontology for biclusters identified by the proposed algorithm for additive models at p-value < 0.001.

From: Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate visualization

Bicluster index

Annotation

P-value

Corrected P-value

Genes

1

SLIK (SAGA-like) complex

4.45E-04

7.56E-02

YBR081C, YBR198C, YDR392W, YDR448W, YGL112C, YMR236W

 

transcription factor TFIID complex

4.45E-04

7.56E-02

YBR198C, YER148W, YGL112C, YML114C, YMR236W, YPL129W

 

INO80 complex

3.75E-04

6.38E-02

YDL002C, YFL039C, YJL081C, YLR052W, YPL129W

3

nucleolus

4.60E-14

4.28E-12

YAL059W, YBR142W, YCL031C, YCL054W, YDR312W, YDR339C, YDR365C, YDR378C, YEL026W, YEL055C, YGR090W, YGR159C, YJL033W, YJR002W, YLL008W, YLL034C, YLR175W, YML074C, YNL110C, YNL132W, YNL175C, YOL077C, YOL080C, YOR145C, YOR272W

 

small nucleolar ribonucleoprotein complex

2.46E-04

2.29E-02

YDL153C, YDR378C, YEL026W, YER082C, YGR090W, YJR002W, YPL126W, YPR137W

4

cytosolic large ribosomal subunit (sensu Eukaryota)

1.76E-23

1.25E-21

YBL092W, YDL075W, YDL081C, YDL082W, YDL136W, YDL191W, YDR012W, YDR382W, YDR471W, YDR500C, YER117W, YHL001W, YHR141C, YKR094C, YLR075W, YLR185W, YLR325C, YLR340W, YLR448W, YML073C, YMR242C, YNL067W, YNL162W, YNL301C, YOL039W, YOL127W, YOR234C, YOR312C, YPL143W, YPL198W, YPR102C

 

cytosolic small ribosomal subunit (sensu Eukaryota)

7.45E-29

5.29E-27

YBL072C, YBR048W, YDL061C, YDL083C, YDR025W, YDR064W, YDR447C, YDR450W, YER074W, YER131W, YGR118W, YGR214W, YIL069C, YJL136C, YJL190C, YJR123W, YKL156W, YKR057W, YLR048W, YLR167W, YLR388W, YLR441C, YML026C, YML063W, YMR143W, YNL096C, YNL302C, YOL040C, YOR167C, YOR293W, YOR369C, YPL081W, YPL090C

 

ribosome

2.87E-05

2.04E-03

YAL003W, YDR385W, YEL034W, YKL056C, YLR249W, YOL139C, YPR163C

5

chromatin remodeling complex

5.68E-04

3.12E-02

YJL176C, YOR290C, YPL016W

8

mitochondrion

1.66E-08

1.11E-06

YBL015W, YBL090W, YBR003W, YBR037C, YBR120C, YBR122C, YBR147W, YCR028C, YDL027C, YDR141C, YDR178W, YDR305C, YDR316W, YDR494W, YDR513W, YEL006W, YEL024W, YER141W, YGL229C, YGR207C, YGR243W, YHR001W, YHR147C, YIL111W, YIL125W, YJL131C, YJL171C, YKL087C, YLL041C, YLR168C, YLR395C, YML120C, YMR145C, YMR167W, YNL037C, YNL073W, YOL038W, YOL059W, YOL096C, YOR065W, YOR317W, YOR356W, YOR386W, YPL005W, YPL029W, YPL103C

 

respiratory chain complex III (sensu Eukaryota)

4.23E-04

2.84E-02

YEL024W, YHR001W, YOR065W

 

endosome

9.02E-05

6.04E-03

YAL030W, YDL113C, YJL053W, YLR119W, YLR408C, YNR006W, YOR036W

9

bud neck

1.42E-06

2.27E-05

YBR038W, YGR092W, YHR023W, YIL106W, YLR190W, YOL070C

10

bud neck

7.51E-04

3.68E-02

YDR507C, YGR152C, YGR238C, YIL140W, YJL187C, YKL101W, YNL233W

 

septin ring

9.01E-05

4.42E-03

YIL140W, YKL101W, YNL233W

14

lipid particle

5.85E-05

2.93E-03

YIL124W, YJR009C, YMR110C, YNL231C, YOR317W

17

mitochondrion

8.16E-06

2.86E-04

YCL057W, YDL027C, YDL164C, YDR116C, YDR194C, YDR375C, YDR513W, YGL104C, YHR002W, YHR067W, YHR147C, YIL087C, YIL111W, YJL063C, YLL040C, YLR270W, YLR346C, YMR098C, YMR152W, YMR188C, YNL063W, YNL073W, YNL200C, YNL274C, YOL059W, YOL071W, YOR136W, YPR011C

18

bud neck contractile ring

6.08E-05

1.58E-03

YHR023W, YJR092W, YMR032W

 

pre-autophagosomal structure

6.62E-04

1.72E-02

YBL078C, YDL113C

20

nuclear cohesin complex

3.74E-04

5.24E-03

YDL003W, YIL026C