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Table 10 Annotations of cellular component ontology for biclusters identified by the proposed algorithm for additive models at p-value < 0.001.

From: Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate visualization

Bicluster index Annotation P-value Corrected P-value Genes
1 SLIK (SAGA-like) complex 4.45E-04 7.56E-02 YBR081C, YBR198C, YDR392W, YDR448W, YGL112C, YMR236W
  transcription factor TFIID complex 4.45E-04 7.56E-02 YBR198C, YER148W, YGL112C, YML114C, YMR236W, YPL129W
  INO80 complex 3.75E-04 6.38E-02 YDL002C, YFL039C, YJL081C, YLR052W, YPL129W
3 nucleolus 4.60E-14 4.28E-12 YAL059W, YBR142W, YCL031C, YCL054W, YDR312W, YDR339C, YDR365C, YDR378C, YEL026W, YEL055C, YGR090W, YGR159C, YJL033W, YJR002W, YLL008W, YLL034C, YLR175W, YML074C, YNL110C, YNL132W, YNL175C, YOL077C, YOL080C, YOR145C, YOR272W
  small nucleolar ribonucleoprotein complex 2.46E-04 2.29E-02 YDL153C, YDR378C, YEL026W, YER082C, YGR090W, YJR002W, YPL126W, YPR137W
4 cytosolic large ribosomal subunit (sensu Eukaryota) 1.76E-23 1.25E-21 YBL092W, YDL075W, YDL081C, YDL082W, YDL136W, YDL191W, YDR012W, YDR382W, YDR471W, YDR500C, YER117W, YHL001W, YHR141C, YKR094C, YLR075W, YLR185W, YLR325C, YLR340W, YLR448W, YML073C, YMR242C, YNL067W, YNL162W, YNL301C, YOL039W, YOL127W, YOR234C, YOR312C, YPL143W, YPL198W, YPR102C
  cytosolic small ribosomal subunit (sensu Eukaryota) 7.45E-29 5.29E-27 YBL072C, YBR048W, YDL061C, YDL083C, YDR025W, YDR064W, YDR447C, YDR450W, YER074W, YER131W, YGR118W, YGR214W, YIL069C, YJL136C, YJL190C, YJR123W, YKL156W, YKR057W, YLR048W, YLR167W, YLR388W, YLR441C, YML026C, YML063W, YMR143W, YNL096C, YNL302C, YOL040C, YOR167C, YOR293W, YOR369C, YPL081W, YPL090C
  ribosome 2.87E-05 2.04E-03 YAL003W, YDR385W, YEL034W, YKL056C, YLR249W, YOL139C, YPR163C
5 chromatin remodeling complex 5.68E-04 3.12E-02 YJL176C, YOR290C, YPL016W
8 mitochondrion 1.66E-08 1.11E-06 YBL015W, YBL090W, YBR003W, YBR037C, YBR120C, YBR122C, YBR147W, YCR028C, YDL027C, YDR141C, YDR178W, YDR305C, YDR316W, YDR494W, YDR513W, YEL006W, YEL024W, YER141W, YGL229C, YGR207C, YGR243W, YHR001W, YHR147C, YIL111W, YIL125W, YJL131C, YJL171C, YKL087C, YLL041C, YLR168C, YLR395C, YML120C, YMR145C, YMR167W, YNL037C, YNL073W, YOL038W, YOL059W, YOL096C, YOR065W, YOR317W, YOR356W, YOR386W, YPL005W, YPL029W, YPL103C
  respiratory chain complex III (sensu Eukaryota) 4.23E-04 2.84E-02 YEL024W, YHR001W, YOR065W
  endosome 9.02E-05 6.04E-03 YAL030W, YDL113C, YJL053W, YLR119W, YLR408C, YNR006W, YOR036W
9 bud neck 1.42E-06 2.27E-05 YBR038W, YGR092W, YHR023W, YIL106W, YLR190W, YOL070C
10 bud neck 7.51E-04 3.68E-02 YDR507C, YGR152C, YGR238C, YIL140W, YJL187C, YKL101W, YNL233W
  septin ring 9.01E-05 4.42E-03 YIL140W, YKL101W, YNL233W
14 lipid particle 5.85E-05 2.93E-03 YIL124W, YJR009C, YMR110C, YNL231C, YOR317W
17 mitochondrion 8.16E-06 2.86E-04 YCL057W, YDL027C, YDL164C, YDR116C, YDR194C, YDR375C, YDR513W, YGL104C, YHR002W, YHR067W, YHR147C, YIL087C, YIL111W, YJL063C, YLL040C, YLR270W, YLR346C, YMR098C, YMR152W, YMR188C, YNL063W, YNL073W, YNL200C, YNL274C, YOL059W, YOL071W, YOR136W, YPR011C
18 bud neck contractile ring 6.08E-05 1.58E-03 YHR023W, YJR092W, YMR032W
  pre-autophagosomal structure 6.62E-04 1.72E-02 YBL078C, YDL113C
20 nuclear cohesin complex 3.74E-04 5.24E-03 YDL003W, YIL026C