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Table 13 Annotations of cellular component ontology for biclusters identified by the proposed algorithm for multiplicative models at p-value < 0.001.

From: Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate visualization

Bicluster index Annotation P-value Corrected P-value Genes
1 DNA-directed RNA polymerase I complex 9.40E-04 1.50E-01 YBR154C, YDR156W, YNL113W, YOR224C, YOR341W
  nucleoplasm 6.60E-04 1.06E-01 YAL059W, YDL051W, YKR002W, YKR095W, YNL175C, YNR053C
  nucleolus 9.69E-17 1.55E-14 YAL025C, YAL059W, YBL004W, YBL026W, YBR142W, YCL031C, YCL054W, YCL059C, YDL051W, YDR299W, YDR312W, YDR339C, YDR365C, YDR378C, YEL026W, YGR090W, YGR159C, YJR002W, YKR060W, YLL008W, YLL034C, YLR051C, YLR068W, YLR186W, YLR223C, YMR049C, YMR131C, YMR233W, YMR269W, YMR290C, YNL110C, YNL132W, YNL147W, YNL175C, YNL299W, YNR038W, YNR046W, YNR053C, YOL041C, YOL077C, YOL144W, YOR145C, YOR272W, YPL211W, YPR112C
  nucleus 1.60E-05 2.56E-03 YAL059W, YAR015W, YBL016W, YBL024W, YBL054W, YBL093C, YBR034C, YBR066C, YBR090C, YBR112C, YBR160W, YBR173C, YCL011C, YCL031C, YCL054W, YCR036W, YCR051W, YCR059C, YCR060W, YCR090C, YDL002C, YDL006W, YDL047W, YDL051W, YDL070W, YDL076C, YDL153C, YDL166C, YDR006C, YDR091C, YDR098C, YDR143C, YDR155C, YDR162C, YDR165W, YDR260C, YDR296W, YDR305C, YDR361C, YDR365C, YDR390C, YDR432W, YDR465C, YDR477W, YEL007W, YER012W, YER042W, YER148W, YGL130W, YGR090W, YGR159C, YGR200C, YJL140W, YJR002W, YJR017C, YJR105W, YKL143W, YKR060W, YKR072C, YKR079C, YKR096W, YLL034C, YLR007W, YLR039C, YLR051C, YLR052W, YLR068W, YLR107W, YLR186W, YLR223C, YLR262C, YLR265C, YLR327C, YLR384C, YLR420W, YLR430W, YML032C, YML053C, YML080W, YML081W, YML114C, YMR009W, YMR021C, YMR049C, YMR070W, YMR074C, YMR092C, YMR176W, YMR178W, YMR226C, YMR233W, YMR235C, YMR308C, YNL004W, YNL016W, YNL110C, YNL136W, YNL164C, YNL186W, YNL199C, YNL215W, YNL299W, YNR003C, YNR046W, YNR053C, YOL093W, YOL108C, YOL143C, YOR006C, YOR056C, YOR123C, YOR145C, YOR189W, YOR206W, YOR252W, YOR272W, YOR283W, YOR304W, YPL047W, YPL086C, YPL204W, YPL212C, YPL268W, YPR069C, YPR073C
  small nucleolar ribonucleoprotein complex 1.97E-05 3.16E-03 YBL004W, YBL026W, YCL059C, YDL153C, YDR378C, YDR449C, YEL026W, YGR090W, YJL191W, YJR002W, YLR186W, YLR222C, YML093W, YMR093W, YNL147W, YPR137W
5 incipient bud site 4.75E-04 2.18E-02 YGR189C, YKR090W, YLL021W, YNL233W, YNL304W
  nucleus 1.26E-05 5.80E-04 YBL046W, YBR073W, YBR088C, YCR065W, YDL006W, YDL103C, YDL164C, YDL197C, YER003C, YER152C, YGR042W, YKL045W, YKL089W, YKL113C, YLL022C, YLR233C, YLR376C, YML021C, YML061C, YML109W, YOR074C, YOR279C, YOR342C, YPL008W, YPL127C, YPL208W, YPL256C, YPR120C, YPR135W
  bud neck 4.38E-04 2.01E-02 YDR507C, YGR152C, YKL101W, YKR090W, YLL021W, YNL233W, YNL304W
11 MCM complex 8.91E-04 5.52E-02 YEL032W, YLR274W, YPR019W
12 bud neck 1.07E-05 3.33E-04 YBR038W, YBR200W, YGR092W, YHR023W, YIL106W, YLR190W, YMR001C, YPR119W
14 spindle microtubule 6.05E-05 2.12E-03 YBL063W, YBR156C, YGL061C
16 endoplasmic reticulum 1.91E-04 4.21E-03 YBR229C, YCR011C, YCR044C, YDL204W, YIL124W, YML128C, YMR134W
  mitochondrion 7.89E-04 1.74E-02 YBR003W, YBR026C, YBR037C, YBR147W, YBR229C, YCR005C, YHL021C, YHR067W, YIL087C, YIL124W, YLR142W, YLR253W, YML128C, YNL073W
24 cytosolic large ribosomal subunit (sensu Eukaryota) 1.11E-45 7.07E-44 YBL027W, YBL092W, YBR031W, YBR191W, YDL075W, YDL081C, YDL082W, YDL130W, YDL136W, YDL191W, YDR012W, YDR382W, YDR418W, YDR471W, YDR500C, YER117W, YHR141C, YJL177W, YJL189W, YKL006W, YKL180W, YKR094C, YLL045C, YLR029C, YLR075W, YLR185W, YLR325C, YLR340W, YLR344W, YLR406C, YLR448W, YML073C, YMR121C, YMR194W, YMR242C, YNL067W, YNL162W, YNL301C, YOL039W, YOL127W, YOR234C, YOR312C, YPL143W, YPL198W, YPR043W, YPR102C
  cytosolic small ribosomal subunit (sensu Eukaryota) 7.45E-43 4.77E-41 YBL072C, YBR048W, YBR181C, YBR189W, YCR031C, YDL061C, YDL083C, YDR025W, YDR064W, YDR447C, YDR450W, YER074W, YER102W, YER131W, YGR118W, YGR214W, YIL069C, YJL136C, YJL190C, YJR123W, YJR145C, YKL156W, YKR057W, YLR048W, YLR167W, YLR333C, YLR388W, YLR441C, YML024W, YML026C, YML063W, YMR116C, YMR143W, YMR230W, YNL096C, YNL302C, YOL040C, YOR167C, YOR293W, YOR369C, YPL081W, YPL090C
  ribosome 4.84E-06 3.10E-04 YAL003W, YBR118W, YDR385W, YEL034W, YKL056C, YLR249W, YOL139C, YPR163C
28 condensed nuclear chromosome 2.75E-04 2.20E-03 YHR157W, YPL194W
31 chromosome, telomeric region 4.77E-04 1.43E-02 YAR007C, YNL312W
  nuclear cohesin complex 3.79E-05 1.14E-03 YDL003W, YFL008W, YIL026C
  DNA replication factor A complex 4.77E-04 1.43E-02 YAR007C, YNL312W
  replication fork 2.99E-04 8.97E-03 YDL164C, YKL108W, YLR103C
34 mitochondrial inner membrane 4.76E-04 2.14E-02 YDL198C, YDR197W, YER058W, YER141W, YOL027C, YPR011C
  mitochondrion 5.60E-06 2.52E-04 YDL198C, YDR194C, YDR197W, YDR301W, YDR322W, YDR505C, YER058W, YER141W, YGL187C, YHR147C, YJR048W, YKL150W, YLR168C, YML030W, YML052W, YML120C, YMR098C, YMR145C, YMR188C, YNL306W, YNR036C, YOL009C, YOL027C, YOL038W, YOL059W, YPR011C
35 retrotransposon nucleocapsid 3.41E-06 9.89E-05 YCL020W, YER160C, YJR026W, YJR028W, YML040W, YOR142W
36 glycine cleavage complex 1.94E-05 4.46E-04 YAL044C, YDR019C, YMR189W
41 nuclear exosome (RNase complex) 4.93E-05 2.02E-03 YNL251C, YOL021C, YOR001W
54 MCM complex 1.19E-04 4.65E-03 YBR202W, YGL201C, YLR274W
  pre-replicative complex 9.21E-04 3.59E-02 YBR202W, YGL201C, YLR274W
56 central plaque of spindle pole body 3.03E-05 8.78E-04 YDR356W, YKL042W, YPL124W