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Table 5 Number of genes declared differentially expressed for triple-target and two-color experiments Number of differentially expressed genes (FDR = 5%).

From: Normalization for triple-target microarray experiments

Comparison Triple-target experiments Two-color experiments Common
C1 versus C2 3353 2188 1925
C1 versus C3 3986 3384 2737
C2 versus C3 4519 3465 2928