Table 1 Genomes of microbial species that were used for the evaluation of our method. The upper three species are archaea while the lower ten species belong to the bacterial domain. The table shows GenBank accession numbers (GenBank Acc.), and genome sizes (Size).
From: Gene prediction in metagenomic fragments: A large scale machine learning approach
Species | GenBank Acc. | Size (Mbp) |
|---|---|---|
Archaeoglobus fulgidus | NC_000917 | 2.2 |
Methanococcus jannaschii | NC_000909 | 1.7 |
Natronomonas pharaonis | NC_007426 | 2.6 |
Buchnera aphidicola | NC_002528 | 0.6 |
Burkholderia pseudomallei | NC_006350, NC_006351 | 7.2 |
Bacillus subtilis | NC_000964 | 4.2 |
Corynebacterium jeikeium | NC_007164 | 2.5 |
Chlorobium tepidum | NC_002932 | 2.2 |
Escherichia coli | NC_000913 | 4.6 |
Helicobacter pylori | NC_000921 | 1.6 |
Pseudomonas aeruginosa | NC_002516 | 6.3 |
Prochlorococcus marinus | NC_007577 | 1.7 |
Wolbachia endosymbiont | NC_006833 | 1.1 |