Predicting MSE2 in four Drosophila species. The figure shows the RMS distribution over the 20 kb surrounding eve, predicted by the best TrainedMinusT6 model, trained on the MSE2 region in D. melanogaster. The orange area shows the location of the annotated or homologous MSE2. The grey shaded areas show the location of other MSEs. The horizontal lines mark the location and extent of the window with the lowest error.