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Table 3 Experimental comparison between SCPRED and structural class assignment methods based on the secondary structure predicted with PSI-PRED.

From: SCPRED: Accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences

Prediction/assignment method

Accuracy

 

all-α

all-β

mixed

overall

[13]

78.8

30.2

66.7

60.3

[14]

91.6

73.1

86.8

84.5

SCPRED (10-fold cross validation)

92.8

80.6

89.2

87.9

SCPRED (jackknife)

92.6

80.1

88.9

87.6