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Table 4 Comparison of accuracy when predicting the structural classes using all features, each feature individually, and when excluding one features at the time.

From: SCPRED: Accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences

Features

Accuracy when predicting with one feature

  

all-α

all-β

α/β

α+β

overall

All features included

92.8

80.6

74.3

71.4

80.1

using only one feature

PSIPRED-NCount H 6

89.6

58.7

32.9

46.7

58.4

 

PSIPRED- NCount H 8

81.9

78.3

53.8

58.7

69.0

 

PSIPRED-CMV H 1

76.3

74.5

55.8

48.8

64.3

 

PSIPRED-NAvgSeg H

49.9

83.3

0.0

47.8

47.9

 

PSIPRED-NCount E 5

85.8

59.1

50.9

47.4

61.4

 

PSIPRED- CV E

88.9

71.3

60.7

51.0

68.4

 

PSIPRED-MaxSeg E

83.1

48.8

0.0

67.1

52.6

 

PSIPRED-NAvgSeg E

79.2

33.9

3.2

42.4

41.8

 

CV L---G

73.8

0.0

54.3

7.7

32.8

excluding the listed feature

PSIPRED-NCount H 6

92.1

79.5

71.7

70.8

78.9

 

PSIPRED-NCount H 8

93.0

79.5

73.1

70.3

79.3

 

PSIPRED-CMV H 1

92.5

80.8

72.5

71.0

79.6

 

PSIPRED-NAvgSeg H

92.5

81.0

71.4

68.7

78.8

 

PSIPRED-NCount E 5

90.7

80.1

73.4

71.4

79.3

 

PSIPRED-CV E

91.9

80.6

72.5

71.4

79.5

 

PSIPRED-MaxSeg E

92.8

79.7

73.1

69.8

79.2

 

PSIPRED-NAvgSeg E

92.3

80.6

71.1

69.2

78.7

 

CV L---G

92.8

80.6

73.4

68.9

79.3

  1. Bold font shows the top two highest accuracies when using individual features, and features selected for further analysis.