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Table 1 Exemplary runs and data. Example runs of the exemplified CPSP-tools application scenarios. The corresponding sequences and structures are given in Table 2. The neutral net N is given in Figure 3.

From: CPSP-tools – Exact and complete algorithms for high-throughput 3D lattice protein studies

Appl. Tool Parameter Result Runtime
1 HPDEG S 0 471354 2.5 s
1 HPDEG S 1 1 0.2 s
2 HPSTRUCT S 0 X0, E = -13 0.01 s
2 HPSTRUCT S 1 X1, E = -22 0.06 s
3 HPNNET X1, S1, deg = 1 S1 .. S4 9 s
4 HPDESIGN X1, minH = 17, so = 2 S1 .. S12 13 m 43 s
4 HPNNET X1, S1 .. S12, deg = 1 N, S1 .. S14 1 m