Table 3 Compression execution time
coil | |||||||||
|---|---|---|---|---|---|---|---|---|---|
Dataset | bz2 | nrdb+ bz2 | 7z | PPMdi | find_edges | encode | tar+bz | other | total |
ems1 | 5.6 | 7.7 | 43.3 | 5.6 | 3.5 | 9.3 | 1.2 | 10.8 | 24.8 |
5.5 | 9.2 | 48.2 | 4.7 | 3.6 | 8.1 | 1.0 | 10.4 | 23.1 | |
5.7 | 10.2 | 43.5 | 4.3 | 3.6 | 8.2 | 1.2 | 12.5 | 25.5 | |
ems2 | 10.3 | 15.1 | 96.5 | 9.9 | 9.5 | 20.0 | 1.0 | 19.1 | 49.5 |
10.3 | 17.7 | 101.4 | 8.5 | 9.7 | 20.2 | 1.0 | 19.0 | 49.8 | |
10.1 | 16.8 | 95.6 | 8.3 | 9.7 | 20.3 | 1.1 | 20.8 | 51.9 | |
ems3 | 15.2 | 22.6 | 154.8 | 14.7 | 17.0 | 36.5 | 1.9 | 27.7 | 83.1 |
16.7 | 24.6 | 162.9 | 12.7 | 17.3 | 35.4 | 2.2 | 28.0 | 82.9 | |
15.4 | 22.4 | 154.2 | 12.8 | 17.3 | 34.5 | 3.1 | 29.2 | 84.2 | |
ems4 | 20.3 | 32.0 | 216.5 | 20.0 | 25.8 | 50.6 | 3.6 | 34.3 | 114.3 |
20.5 | 33.4 | 221.1 | 17.4 | 26.7 | 50.3 | 3.0 | 37.1 | 117.1 | |
20.0 | 31.1 | 215.0 | 17.0 | 26.0 | 49.1 | 3.3 | 39.3 | 117.7 | |
ems5 | 30.3 | 39.1 | 276.7 | 25.3 | 35.5 | 65.4 | 4.2 | 42.7 | 147.7 |
25.5 | 43.5 | 280.4 | 21.5 | 35.7 | 65.5 | 4.1 | 45.2 | 150.5 | |
25.3 | 38.7 | 275.9 | 21.4 | 35.8 | 64.6 | 4.1 | 46.2 | 150.7 | |
ems10 | 62.5 | 85.1 | 573.8 | 49.8 | 100.5 | 179.3 | 8.4 | 100.4 | 388.6 |
60.7 | 88.0 | 580.8 | 45.5 | 102.1 | 176.0 | 9.0 | 84.4 | 371.4 | |
50.6 | 80.1 | 575.4 | 43.5 | 100.5 | 160.8 | 9.4 | 87.7 | 358.4 | |
ems15 | 94.3 | 117.8 | 871.1 | 69.0 | 197.9 | 271.8 | 12.6 | 118.2 | 600.6 |
76.7 | 136.5 | 876.5 | 64.7 | 198.5 | 276.9 | 13.7 | 130.5 | 619.5 | |
89.8 | 119.6 | 869.5 | 64.5 | 196.1 | 275.8 | 13.8 | 133.4 | 619.1 | |
ems20 | 101.5 | 169.9 | 1163.0 | 92.8 | 317.1 | 393.5 | 16.7 | 176.0 | 903.5 |
101.7 | 179.7 | 1169.3 | 86.9 | 321.6 | 393.5 | 18.5 | 212.2 | 945.8 | |
120.5 | 158.8 | 1161.3 | 84.9 | 319.6 | 399.7 | 16.9 | 215.6 | 951.8 | |
ems25 | 133.0 | 207.7 | 1482.2 | 116.0 | 471.7 | 503.2 | 22.5 | 280.8 | 1278.1 |
152.3 | 220.7 | 1438.9 | 105.9 | 470.9 | 467.2 | 22.3 | 218.4 | 1178.8 | |
171.0 | 196.3 | 1456.4 | 106.0 | 468.0 | 504.4 | 23.4 | 248.0 | 1243.8 | |
ems50 | 306.2 | 411.2 | 2882.0 | 215.4 | 1657.4 | 1172.3 | 105.4 | 716.3 | 3651.4 |
340.0 | 452.4 | 2893.3 | 209.2 | 1658.2 | 1170.7 | 104.5 | 583.7 | 3517.1 | |
291.1 | 411.6 | 2888.3 | 207.2 | 1655.5 | 1174.7 | 107.9 | 671.8 | 3609.9 | |
ems75 | 500.7 | 712.4 | 4328.8 | 314.4 | 3517.1 | 1814.9 | 167.8 | 1173.4 | 6673.2 |
506.8 | 618.1 | 4304.5 | 311.9 | 3502.1 | 1810.2 | 164.7 | 992.9 | 6469.8 | |
508.7 | 593.5 | 4298.9 | 317.7 | 3490.7 | 1798.6 | 165.0 | 1116.4 | 6570.6 | |
ems100 | 668.6 | 5760.8 | 408.5 | 6064.4 | 2552.4 | 223.9 | 1421.8 | 10262.6 | |
634.1 | 5707.5 | 404.1 | 6042.3 | 2524.8 | 219.3 | 1429.0 | 10215.3 | ||
689.2 | 5773.6 | 403.3 | 6114.1 | 2496.4 | 217.5 | 1546.2 | 10374.1 | ||
ems100* | 6446.3 | 2515.4 | 218.6 | 1505.8 | 10686.1 | ||||
rfam_full | 32.8 | 75.8 | 7.9 | 114.8 | 12.8 | 4.0 | 40.7 | 172.3 | |
29.6 | 75.3 | 7.9 | 113.9 | 12.3 | 4.3 | 38.2 | 168.7 | ||
29.6 | 75.5 | 7.8 | 114.5 | 12.4 | 4.2 | 36.0 | 167.1 | ||