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Table 2 DisEMBL and TMHMM predictions for phosphorylation sites in the PredikinDB database

From: Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites

Residue

Phosphorylation sites1

Disordered (%)2

TM helix (%)3

S

17,575

16,596 (94.4)

6 (0.03)

T

3,705

3,371 (91.0)

6 (0.16)

Y

1 929

1,410 (73.1)

5 (0.26)

Total

23,209

21,377 (92.1)

17 (0.07)

  1. 1Number of phosphoresidues annotated "experimental"
  2. 2Number and percentage of phosphoresidues predicted as disordered using at least one DisEMBL method
  3. 3Number and percentage of phosphoresidues predicted as TM helix using TMHMM
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BMC Bioinformatics

ISSN: 1471-2105

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