Skip to main content

Table 4 Predikin scores for two usage cases

From: Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites

Substrates for S. cerevisiae kinase CLA41 Kinases for S. pombe Rpb1 SPTSPSY2
Substrate Position Heptapeptide Score Kinase Score
CLA4 727 KRATMVG 92.93 NP_592843 86.62
YOL113W 541 KRATMVG 92.93 NP_594393 84.73
YHL021C 129 KGSSFVS 91.87 NP_595739 81.60
YKR010C 527 KRNSITE 91.70 NP_595616 81.60
YNL049C 526 RATSFFG 90.14 NP_595629 81.60
YDL056W 477 KRKSTTP 88.70 NP_587921 81.60
YOL157C 527 KLFSFTK 88.25 NP_596349 81.60
YBR198C 157 RAYSMLK 87.71 NP_595795 68.41
  1. 1Top 8 Predikin scores (SDR method) from a set of 163 putative substrates for protein kinase CLA4 (UniProt accession P48562) from S. cerevisiae
  2. 2Top 8 Predikin scores (KSD method) for kinases at SPTSPSY repeats in substrate Rpb1 (UniProt accession P36594) from S. pombe