Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites

Table 4 Predikin scores for two usage cases

Substrates for *S. cerevisiae* kinase CLA4¹				Kinases for *S. pombe* Rpb1 SPTSPSY²
Substrate	Position	Heptapeptide	Score	Kinase	Score
CLA4	727	KRATMVG	92.93	NP_592843	86.62
YOL113W	541	KRATMVG	92.93	NP_594393	84.73
YHL021C	129	KGSSFVS	91.87	NP_595739	81.60
YKR010C	527	KRNSITE	91.70	NP_595616	81.60
YNL049C	526	RATSFFG	90.14	NP_595629	81.60
YDL056W	477	KRKSTTP	88.70	NP_587921	81.60
YOL157C	527	KLFSFTK	88.25	NP_596349	81.60
YBR198C	157	RAYSMLK	87.71	NP_595795	68.41

¹Top 8 Predikin scores (SDR method) from a set of 163 putative substrates for protein kinase CLA4 (UniProt accession P48562) from S. cerevisiae
²Top 8 Predikin scores (KSD method) for kinases at SPTSPSY repeats in substrate Rpb1 (UniProt accession P36594) from S. pombe

ISSN: 1471-2105