From: Word correlation matrices for protein sequence analysis and remote homology detection
Method | avg. ROC | avg. ROC50 | avg. mRFP | avg. # SV |
---|---|---|---|---|
WCM 1 | 0.8705 | 0.3153 | 0.1065 | 1798 |
WCM 2 | 0.8926 | 0.3814 | 0.0833 | 1673 |
WCM 3 | 0.8964 | 0.4040 | 0.0813 | 1628 |
WCM 4 | 0.9013 | 0.4257 | 0.0801 | 1604 |
WCM 5 | 0.9032 | 0.4413 | 0.0795 | 1591 |
WCM 6 | 0.9044 | 0.4473 | 0.0778 | 1591 |
WCM 7 | 0.9036 | 0.4454 | 0.0785 | 1600 |
WCM 8 | 0.9024 | 0.4470 | 0.0801 | 1607 |
WCM 9 | 0.9018 | 0.4516 | 0.0815 | 1614 |
WCM 10 | 0.9012 | 0.4528 | 0.0830 | 1620 |
LA-eig | 0.9348 | 0.6614 | 0.0489 | 2640 |
ODH Monomer | 0.9135 | 0.4554 | 0.0729 | 1601 |
SVM pairwise | 0.9008 | 0.3986 | 0.0810 | 2355 |
Mismatch (5,1) | 0.8852 | 0.3815 | 0.0949 | 2943 |
Spectrum (3) | 0.8239 | 0.2939 | 0.1535 | 2350 |
Spectrum {1,2} | 0.8919 | 0.3913 | 0.0798 | 1560 |
Spectrum {1,2,3} | 0.8957 | 0.4094 | 0.0766 | 1711 |
Spectrum {1,2,3,4} | 0.8981 | 0.4180 | 0.0769 | 1882 |