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Figure 6 | BMC Bioinformatics

Figure 6

From: GPR17: Molecular modeling and dynamics studies of the 3-D structure and purinergic ligand binding features in comparison with P2Y receptors

Figure 6

Model of the complex formed by UDP and GPR17 after 3 ns of MD simulation. UDP is displayed in yellow within the binding pocket in the detailed picture (a) and as spheres in the schematic representation of the entire ligand-receptor complex (b). In the tube representation, helices are coloured with a spectrum of colours whose gradient ranges from red (TM1) to blue (TM7). Spheres are coloured by element type: carbon is in grey, oxygen is in red, nitrogen is in blue, phosphorous is in purple and polar hydrogen is in white.

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