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Table 1 Validation of novel genes

From: Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data

Gene

Phase

p-value

Transcription Factors

PCL9

M/G1

0.0495

Swi5

CHS1

M/G1

0.0098

Swi5

YDL117W

M/G1

0.0110

 

YBR296C

M/G1

0.0104

 

SST2

M/G1

0.0224

 

AGA1

M/G1

0.0048

Mcm1, Mbp1, Swi4, Swi6

TSL1

G1

0.0274

Fkh1, Fkh2, Ndd1, Ace2, Swi5, Mbp1, Swi4, Swi6

CLB6

G1

0.0027

Fkh2, Mbp1, Swi4, Swi6

SVS1

G1

0.0001

Fkh1, Fkh2, Swi4, Swi6

POL30

G1

0.0268

 

MCD4

G1

0.0257

 

YOX1

G1

0.0085

Fkh2, Mbp1, Swi4, Swi6

CLN2

G1

0.0088

Swi6

YMR305C

G1

0.0187

Mcm1, Mbp1, Swi4, Swi6

HHT1

S

0.0403

Fkh2

HHO1

S

0.0162

Swi4, Swi6

YIL129C

G2

0.0021

Swi5

YMR215W

G2

0.0025

Fkh1, Fkh2, Mbp1, Swi6

CIK1

G2

0.0126

Fkh1, Fkh2

CDC5

M

0.0033

Ndd1

YPR156C

M

0.0064

 

YPR157W

M

0.0219

 

NCE2

M

0.0203

Fkh2, Ndd1, Swi4

FET3

M

0.0042

 

YOR383C

M

0.0371

 

YDL039C

M

0.0089

 

CLN3

M

0.0108

Mcm1, Ace2, Swi5, Swi4, Swi6

MFA2

M

0.0216

Fkh1, Ndd1, Mcm1, Swi5

  1. Novel differentially expressed genes identified by the proposed method. Genes are grouped based on the phase of the cell-cycle where they show peak expression.