SiteSeek: Post-translational modification analysis using adaptive locality-effective kernel methods and new profiles

Table 3 Prediction results of Adaptive-LEKM for the four kinase families.

K-Families	Accuracy (Ac)	Sensitivity (Sn)	Specificity (Sp)	Correlation-Coefficient (Cc)	Type I ER	Type II ER
CDK	0.909	0.895	0.921	0.817	0.043	0.046
	0.777	0.455	0.992	0.900
CK2	0.918	0.881	0.948	0.835	0.029	0.051
	0.840	0.765	0.888	0.660
PKA	0.891	0.843	0.929	0.779	0.039	0.069
	0.816	0.561	0.987	0.640
PKC	0.827	0.731	0.903	0.650	0.053	0.118
	0.726	0.475	0.898	0.420
Avg.	0.886	0.838	0.925	0.770	0.041	0.071
	0.790	0.564	0.941	0.655
Var.	0.041	0.074	0.019	0.083	0.010	0.032
	0.050	0.142	0.056	0.196

The experimental results of SiteSeek are written in bold and others are the consensus results of literature obtained by Kim et al 2004.

ISSN: 1471-2105