From: Methods for evaluating gene expression from Affymetrix microarray datasets
Method | AD | MAS5.0 | MBEI1 | MBEI2 | RMA | GCRMA | PDNN |
---|---|---|---|---|---|---|---|
AD | 0.991 ± 0.005 | 0.975 ± 0.004 | 0.988 ± 0.001 | 0.985 ± 0.001 | 0.647 ± 0.007 | 0.791 ± 0.008 | 0.615 ± 0.007 |
MAS5.0 | 0.973 | 0.984 ± 0.009 | 0.961 ± 0.005 | 0.965 ± 0.003 | 0.619 ± 0.026 | 0.748 ± 0.024 | 0.583 ± 0.026 |
MBEI1 | 0.987 | 0.958 | 0.990 ± 0.005 | 0.988 ± 0.001 | 0.664 ± 0.011 | 0.797 ± 0.009 | 0.629 ± 0.008 |
MBEI2 | 0.985 | 0.963 | 0.988 | 0.990 ± 0.005 | 0.643 ± 0.006 | 0.774 ± 0.006 | 0.605 ± 0.006 |
RMA | 0.647 | 0.616 | 0.662 | 0.643 | 0.993 ± 0.003 | 0.914 ± 0.002 | 0.939 ± 0.008 |
GCRMA | 0.791 | 0.744 | 0.797 | 0.774 | 0.914 | 0.992 ± 0.005 | 0.923 ± 0.004 |
PDNN | 0.614 | 0.581 | 0.628 | 0.604 | 0.940 | 0.923 | 0.992 ± 0.005 |