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Figure 2 | BMC Bioinformatics

Figure 2

From: Precise detection of rearrangement breakpoints in mammalian chromosomes

Figure 2

Example of two conflicting arcs of type I. On the left side is a dotplot representation of the positions of anchors a, b and c on the genomes G r and G o . They are all on the same chromosome in the two genomes and d(a, b) = d(a, c) = 2. On the right-hand side is the corresponding graph G MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaWenfgDOvwBHrxAJfwnHbqeg0uy0HwzTfgDPnwy1aaceaGae8NbXFeaaa@3755@ 2 (k = 2). The arcs ab and ac are conflicting, because the order of the markers of a, b and c in G r is a, b, c, whereas it is a, c, b in G o .

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