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Figure 3 | BMC Bioinformatics

Figure 3

From: Precise detection of rearrangement breakpoints in mammalian chromosomes

Figure 3

Example of a conflicting arc of type II. On the left-hand side is a dotplot representation of the positions of anchors a, b, x and y on the G r and G o . Anchors a and b are on the same chromosome in the two genomes and d(a, b) = 2, the same for x and y. On the right-hand side is the corresponding graph G MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaWenfgDOvwBHrxAJfwnHbqeg0uy0HwzTfgDPnwy1aaceaGae8NbXFeaaa@3755@ 2 (k = 2). It has two connected components: {a, b} and {x, y}. The arc ab is conflicting because a r <x r <b r and x belongs to another component with at least two anchors.

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