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Table 1 GO categories significantly (FDR < 0.10) enriched among genes belonging to SCC Clusters A and B.

From: Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient

GO id Term Genes p value (ORA)
Cluster A    
GO:0050658 RNA transport 5 0.0002
Cluster B    
GO:0009615 response to virus 8 0.0001
GO:0008047 enzyme activator activity 5 0.0002
GO:0030312 external encapsulating structure 5 0.0002
GO:0017077 oxidative phosphorylation uncoupler activity 5 0.0002
GO:0008287 protein serine/threonine phosphatase complex 9 0.0003
GO:0015071 protein phosphatase type 2C activity 6 0.005
GO:0016311 dephosphorylation 11 0.001
GO:0042221 response to chemical stimulus 48 0.0011
GO:0005730 nucleolus 8 0.0022
GO:0042364 water-soluble vitamin biosynthesis 8 0.0022
GO:0009738 abscisic acid mediated signaling 8 0.0022
GO:0006810 transport 92 0.0022
GO:0005886 plasma membrane 25 0.0027
GO:0009755 hormone-mediated signaling 14 0.0035
  1. GO id: the Gene Ontology identifier for each over-represented Gene Ontology terms. Term: the name of the term. Genes: Number of genes on the array with the GO annotation term in column 1. P value: The unadjusted p value from the over-representation analysis (ORA) test.