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Table 3 The LOOCV performances of the SVM with various kinds of features:

From: Computational identification of ubiquitylation sites from protein sequences

  Feature Window size w C γ ACC (%) SEN (%) SPE (%) MCC AUC
1 Informative physicochemical properties (UbiPred) 21 4 2-1 84.44 83.44 85.43 0.69 0.85
2 All physicochemical properties 17 1 2-4 72.19 70.86 73.51 0.44 0.74
3 Amino acid identity 13 2 2-2 65.67 57.33 74.00 0.32 0.70
4 Evolutionary information 13 1 2-7 66.33 72.00 60.67 0.33 0.71
  1. informative physicochemical properties (UbiPred), amino acid identity, evolutionary information, and all physicochemical properties.