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Table 4 Significant Genes from Two Platforms

From: Assessing probe-specific dye and slide biases in two-color microarray data

Facility

30% FDR

20% FDR

10% FDR

5% FDR

UC Davis

0

0

0

0

UC Davis

38

4

0

0

Agilent

4445

3119

1912

1367

Agilent

1553

1018

0

0

  1. In either case in UC Davis or Agilent, the numbers on the first row are the number of significant genes for the regression on dose and the numbers on the second row are for the regression on modified log dose.