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Figure 1 | BMC Bioinformatics

Figure 1

From: PatternLab for proteomics: a tool for differential shotgun proteomics

Figure 1

MudPIT simulator. The image displays the graphical user interface of the MudPIT simulator available on the project's website for didactic purposes. The simulator allows one to specify MudPIT parameters and then see the two-dimensional liquid chromatography simulation proceed on the fly. This is a simplification of reality; therefore, the timescale and many other features are not faithful representations. The green and pinkish structures in the upper part of the simulator represent the strong cation exchange and the reverse phase material packed in the capillary (yellow structure). The semi-conical structure represents the mass spectrometer nozzle (entrance) and the structure below is an X-Ray of a quadrupole ion trap.

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