From: PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
Tool name | Purpose |
---|---|
charnet | Computing clusters, trees and tripartitions in a network |
cmpnets | Computing the distance between two networks |
lca | Finding the last common ancestor of a set of nodes |
mast | Computing the maximum agreement subtree |
netpars | Scoring the parsimony of sequences on a pair of networks |
riatahgt | Reconstructing HGT events from a pair of species/gene trees |
rf | Computing the Robinson-Foulds tree measure |