Skip to main content

Table 1 Correlation of TO scores with various other similarity measures

From: Gene Ontology term overlap as a measure of gene functional similarity

 

Pearson

Spearman

Resnik

0.56

0.77

ResnikMax

0.77

0.87

Lin

0.47

0.74

LinMax

0.64

0.83

Jiang

0.36

0.65

JiangMax

0.58

0.78

NTO

0.65

0.82

Kappa

0.76

0.89

Cosine

0.75

0.82

Weighted Cosine

0.51

0.90

  1. Pearson and rank correlation values were calculated for the scores generated by TO versus each of the seven other measures for the final dataset R100 K, containing 100,000 random gene pairs.