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Table 3 Summary of most abundant merged and non-merged OPFs from the three whalebone communities.

From: A statistical toolbox for metagenomics: assessing functional diversity in microbial communities

Number of ORFs in OPF Putative annotation Representative GenBank Accession
AGZO AHAA AHAI   
Merged OPFs
386 32 26 Histidine kinase YP_341128
229 175 166 ABC transporter ZP_01203057
137 21 22 Aerotaxis sensor receptor YP_339458
91 27 33 Sensory box protein YP_341105
75 39 65 ATP-dependent RNA helicase protein NP_518660
74 62 51 Translation elongation factor ZP_01061839
56 85 104 Acyl-CoA dehydrogenase ZP_01106089
52 68 66 Aldehyde dehydrogenase YP_341708
49 65 93 Copper transport membrane protein ZP_01060525
49 53 72 Acetyl-CoA acetyltransferase ZP_01165108
44 45 66 Cation efflux protein YP_678123
Non-merged OPFs
8 5 3 Thioredoxin ZP_01901399
7 3 5 Conserved hypothetical protein ZP_01054178
6 5 3 GTP-binding protein LepA YP_745328
6 3 9 DNA topoisomerase IV, subunit A YP_756797
5 6 3 50S ribosomal protein, L20 ZP_01108363
5 6 3 50S ribosomal protein, L14 ZP_00952078
5 4 7 30S ribosomal protein, S11 ZP_01302802
4 8 5 Recombination protein, RecR ZP_00948629
3 4 6 DNA helicase, RuvB YP_357747