Table 3 SynBlast results for Danio rerio, Ensembl release 46 (Aug 2007), Zv7 assembly with the human ParaHox clusters as query.
From: SynBlast: Assisting the analysis of conserved synteny information
Reference | DrA1 chr.24 20 M pdx1 | DrA2 chr.5 60 M gsh1 | DrB chr.7 50 M | DrB1 chr.14 37 M cdx4 | DrC1 chr.20 20 M gsh2 | DrC2 chr.1 10 M | DrD1? chr.14 53 M | DrD1? chr.14 22 M | DrD1 chr.14 25 M cdx1a | DrD2 chr.21 43 M CDX1 | DrD2? chr.21 36 M |
|---|---|---|---|---|---|---|---|---|---|---|---|
HsA/C1 | 2.49 | 0.25 | 0.52 | 0.05 | -0.65 | - | - | - | 1.3 | - | (0.13) |
CDX2 | 8343 | 2291 | 1605 | 1537 | 1922 | - | - | - | 1757 | - | (1112) |
chr.13 | 2/1 | 7/2 | 5/5 | 9/6 | 40/3 | - | - | - | 3/4 | - | (8/8) |
HsB/C2 | (-0.41) | (-0.7) | 2.53 | 0.47 | (-0.04) | -0.02 | - | - | -0.75 | -0.14 | - |
CDX4 | (237) | (139) | 2934 | 1192 | (114) | 669 | - | - | 543 | 183 | - |
chr.X | (19/25) | (31/38) | 1/1 | 3/2 | (7/41) | 5/7 | - | - | 34/10 | 12/32 | - |
HsC/C3 | -1.47 | -1.56 | -0.33 | -2.52 | 3.23 | 0.91 | - | - | -0.46 | - | (-0.37) |
GSH2 | 1478 | 507 | 1424 | 1595 | 4756 | 1880 | - | - | 469 | - | (488) |
chr.4 | 54/4 | 55/7 | 19/5 | 56/3 | 1/1 | 3/2 | - | - | 26/9 | - | (23/8) |
HsD/C4 | -0.6 | (-2.77) | (-3.57) | -3.44 | -3.31 | (-0.06) | 0.79 | 0.03 | -0.41 | 0.18 | 5.27 |
CDX1 | 439 | (254) | (2238) | 953 | 940 | (991) | 1796 | 1514 | 846 | 1107 | 2550 |
chr.5 | 13/41 | (24/57) | (42/2) | 41/12 | 37/13 | (7/11) | 2/4 | 6/5 | 11/16 | 4/9 | 1/1 |