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Table 2 Description of genes selected by t-test or CASh (n = 28).

From: Combining Shapley value and statistics to the analysis of gene expression data in children exposed to air pollution

ProbeID

Genbank Accession

Gene Symbol

GeneName

Effect

Selected by

A_23_P154849

NM_138983

OLIG1

oligodendrocyte transcription factor 1

0,48

CASh

A_23_P35534

NM_020999

NEUROG3

neurogenin 3

0,28

CASh, t-test

A_23_P29248

NM_003312

TST

thiosulfate sulfurtransferase (rhodanese)

0,27

CASh, t-test

A_23_P412409

NM_015172

BAT2D1

BAT2 domain containing 1

-0,25

CASh, t-test

A_23_P382775

NM_014417

BBC3

BCL2 binding component 3

0,25

t-test

A_23_P122445

NM_005319

HIST1H1C

histone 1, H1c

0,25

CASh

A_23_P219060

NM_022107

GPSM3

G-protein signalling modulator 3 (AGS3-like, C. elegans)

0,24

t-test

A_23_P23194

NM_032409

PINK1

PTEN induced putative kinase 1

0,24

t-test

A_23_P69652

NM_080819

GPR78

G protein-coupled receptor 78

0,23

t-test

A_23_P154766

NM_080611

DUSP15

dual specificity phosphatase 15

0,22

CASh, t-test

A_23_P8293

AK093571

SCML4

sex comb on midleg-like 4 (Drosophila)

-0,22

CASh

A_23_P132285

NM_001013440

MPST

mercaptopyruvate sulfurtransferase

0,21

t-test

A_23_P38876

NM_005357

LIPE

lipase, hormone-sensitive

0,20

CASh

A_23_P357374

NM_178449

TIP39

tuberoinfundibular 39 residue protein precursor

0,20

CASh

A_23_P22487

NM_013271

PCSK1N

proprotein convertase subtilisin/kexin type 1 inhibitor

0,19

CASh, t-test

A_23_P143385

NM_004118

FKHL18

forkhead-like 18 (Drosophila)

0,19

t-test

A_23_P42991

unknown

unknown

unknown

0,18

CASh, t-test

A_23_P401524

NM_005205

COX6A2

cytochrome c oxidase subunit VIa polypeptide 2

0,17

CASh

A_23_P54330

NM_014691

AQR

aquarius homolog (mouse)

-0,17

t-test

A_23_P60520

U43747

FXN

frataxin

0,16

CASh, t-test

A_23_P57089

NM_020182

TMEPAI

transmembrane, prostate androgen induced RNA

0,16

CASh

A_23_P109837

NM_014850

SRGAP3

SLIT-ROBO Rho GTPase activating protein 3

0,16

t-test

A_23_P8571

NM_080744

SRCRB4D

scavenger receptor cysteine rich domain containing, group B (4 domains)

0,16

CASh

A_23_P109643

NM_172027

ABTB1

ankyrin repeat and BTB (POZ) domain containing 1

0,15

CASh

A_23_P57941

NM_005777

RBM6

RNA binding motif protein 6

-0,15

CASh

A_23_P130926

NM_017914

C19orf24

chromosome 19 open reading frame 24

0,13

CASh

A_23_P106641

NM_014329

RCD-8

autoantigen

-0,10

CASh

A_23_P127475

NM_005125

CCS

copper chaperone for superoxide dismutase

0,08

CASh

  1. Expression changes of the 28 genes that were selected by t-test or CASh at p-value< 0.0001. 'Effect' column shows the difference between the average expression ratio in TP minus the average expression ratio in PR. In the last column, the method used for each gene selection is shown: t-test or CASh or both.