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Table 2 Description of genes selected by t-test or CASh (n = 28).

From: Combining Shapley value and statistics to the analysis of gene expression data in children exposed to air pollution

ProbeID Genbank Accession Gene Symbol GeneName Effect Selected by
A_23_P154849 NM_138983 OLIG1 oligodendrocyte transcription factor 1 0,48 CASh
A_23_P35534 NM_020999 NEUROG3 neurogenin 3 0,28 CASh, t-test
A_23_P29248 NM_003312 TST thiosulfate sulfurtransferase (rhodanese) 0,27 CASh, t-test
A_23_P412409 NM_015172 BAT2D1 BAT2 domain containing 1 -0,25 CASh, t-test
A_23_P382775 NM_014417 BBC3 BCL2 binding component 3 0,25 t-test
A_23_P122445 NM_005319 HIST1H1C histone 1, H1c 0,25 CASh
A_23_P219060 NM_022107 GPSM3 G-protein signalling modulator 3 (AGS3-like, C. elegans) 0,24 t-test
A_23_P23194 NM_032409 PINK1 PTEN induced putative kinase 1 0,24 t-test
A_23_P69652 NM_080819 GPR78 G protein-coupled receptor 78 0,23 t-test
A_23_P154766 NM_080611 DUSP15 dual specificity phosphatase 15 0,22 CASh, t-test
A_23_P8293 AK093571 SCML4 sex comb on midleg-like 4 (Drosophila) -0,22 CASh
A_23_P132285 NM_001013440 MPST mercaptopyruvate sulfurtransferase 0,21 t-test
A_23_P38876 NM_005357 LIPE lipase, hormone-sensitive 0,20 CASh
A_23_P357374 NM_178449 TIP39 tuberoinfundibular 39 residue protein precursor 0,20 CASh
A_23_P22487 NM_013271 PCSK1N proprotein convertase subtilisin/kexin type 1 inhibitor 0,19 CASh, t-test
A_23_P143385 NM_004118 FKHL18 forkhead-like 18 (Drosophila) 0,19 t-test
A_23_P42991 unknown unknown unknown 0,18 CASh, t-test
A_23_P401524 NM_005205 COX6A2 cytochrome c oxidase subunit VIa polypeptide 2 0,17 CASh
A_23_P54330 NM_014691 AQR aquarius homolog (mouse) -0,17 t-test
A_23_P60520 U43747 FXN frataxin 0,16 CASh, t-test
A_23_P57089 NM_020182 TMEPAI transmembrane, prostate androgen induced RNA 0,16 CASh
A_23_P109837 NM_014850 SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 0,16 t-test
A_23_P8571 NM_080744 SRCRB4D scavenger receptor cysteine rich domain containing, group B (4 domains) 0,16 CASh
A_23_P109643 NM_172027 ABTB1 ankyrin repeat and BTB (POZ) domain containing 1 0,15 CASh
A_23_P57941 NM_005777 RBM6 RNA binding motif protein 6 -0,15 CASh
A_23_P130926 NM_017914 C19orf24 chromosome 19 open reading frame 24 0,13 CASh
A_23_P106641 NM_014329 RCD-8 autoantigen -0,10 CASh
A_23_P127475 NM_005125 CCS copper chaperone for superoxide dismutase 0,08 CASh
  1. Expression changes of the 28 genes that were selected by t-test or CASh at p-value< 0.0001. 'Effect' column shows the difference between the average expression ratio in TP minus the average expression ratio in PR. In the last column, the method used for each gene selection is shown: t-test or CASh or both.