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Table 5 Cross-classification of latent classes obtained from proposed method with clusters obtained from HOPACH

From: Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions

Class

1

2

3

4

5

6

7

8

9

Total

000

    

28

    

28

0010

    

24

    

24

0011

    

23

    

23

0100

  

2

 

12

    

14

01010

   

5

     

5

0101100

   

3

     

3

0101101

   

3

     

3

010111

   

1

1

    

2

01100

    

1

1

   

2

01101

      

4

 

1

5

0111

      

12

1

 

13

1000

 

3

       

3

100100

 

2

       

2

100101

 

4

       

4

1001100

 

3

       

3

1001101

 

4

       

4

100111

 

5

       

5

101

 

34

       

34

1100

18

        

18

1101

12

        

12

11100

  

5

      

5

11101

  

3

      

3

1111

1

  

1

     

2

Total

31

55

10

13

89

1

16

1

1

217

  1. Rows represent classes from proposed method, labeled with the sequence vector representing the terminal node from which the class was derived. Columns represent clusters from HOPACH.