Figure 3
From: Large-scale identification of polymorphic microsatellites using an in silico approach
Flowchart of the PolySSR core program. Two parameters used in step 2 are the degree of matching in a repeat motif and the degree of matching in a repeat chain; four parameters used in step 3 include two parameters from step 2, and plus the length of flanking sequences of repeats and the minimum repeat times for different length of repeat motifs; three parameters used in step 4 consist of two parameters used in step 2 and the minimum number of sequences per allele. * actions in steps 2, 3 and 4 all use the algorithm described in Figure 4 and in the Materials and Methods section.