Table 3 Comparison of classifiers performance as measured by AUC
From: Improving peptide-MHC class I binding prediction for unbalanced datasets
allele | Trees, unit λ2 | Trees, best λ2 | ARB* | SMM* | ANN* | External Tool* |
|---|---|---|---|---|---|---|
A0101 | .903 | .951 | .964 | .980 | .982 | .955 |
A0201 | .796 | .842 | .934 | .952 | .957 | .922 |
A0202 | .770 | .770 | .875 | .899 | .900 | .793 |
A0203 | .746 | .781 | .884 | .916 | .921 | .788 |
A0206 | .732 | .747 | .872 | .914 | .927 | .735 |
A0301 | .763 | .763 | .908 | .940 | .937 | .851 |
A1101 | .841 | .859 | .918 | .948 | .951 | .869 |
A2301 | .742 | .782 | NA | NA | NA | NA |
A2402 | .685 | .748 | .718 | .780 | .825 | .770 |
A2403 | .673 | .846 | NA | NA | NA | NA |
A2601 | .606 | .811 | .907 | .931 | .956 | .736 |
A2902 | .783 | .847 | NA | NA | NA | NA |
A3001 | .741 | .861 | NA | NA | NA | NA |
A3002 | .777 | .810 | NA | NA | NA | NA |
A3101 | .825 | .833 | .909 | .930 | .928 | .829 |
A3301 | .636 | .827 | .892 | .925 | .915 | .807 |
A6801 | .756 | .761 | .840 | .885 | .883 | .772 |
A6802 | .699 | .714 | .865 | .898 | .899 | .643 |
A6901 | .614 | .813 | NA | NA | NA | NA |
B0702 | .887 | .911 | .952 | .964 | .965 | .942 |
B0801 | .547 | .835 | .936 | .943 | .955 | .766 |
B1501 | .759 | .823 | .900 | .952 | .941 | .816 |
B1801 | .745 | .833 | .573 | .853 | .838 | .779 |
B2705 | .753 | .892 | .915 | .940 | .938 | .926 |
B3501 | .712 | .771 | .851 | .889 | .875 | .792 |
B4001 | .587 | .897 | NA | NA | NA | NA |
B4002 | .718 | .778 | .541 | .842 | .754 | .775 |
B4402 | .588 | .762 | .533 | .740 | .778 | .783 |
B4403 | .647 | .804 | .461 | .770 | .763 | .698 |
B4501 | .679 | .824 | NA | NA | NA | NA |
B5101 | .664 | .792 | .822 | .868 | .866 | .820 |
B5301 | .795 | .819 | .871 | .882 | .899 | .861 |
B5401 | .654 | .796 | .847 | .921 | .903 | .799 |
B5701 | .756 | .936 | .428 | .871 | .826 | .767 |
B5801 | .815 | .864 | .899 | .964 | .961 | .899 |