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Table 4 Summary of the blind test results on PDB491 and PDB366 datasets

From: Sequence based residue depth prediction using evolutionary information and predicted secondary structure

 

PDB491

PDB366

Method

PCC

MAE

MRE (%)

PCC

MAE

MRE (%)

PSSM+PS

0.663

0.638 (0.053,1.615)

20.4 (2.5,45.7)

0.650

0.601 (0.051,1.520)

19.8 (2.5,44.4)

RDPred

0.666

0.609 (0.041,1.635)

18.8 (2.0,44.4)

0.654

0.573 (0.038,1.534)

18.3 (1.9,43.2)

  1. The prediction model was trained on YW923 dataset.
  2. The values in the brackets correspond to the 10th and 90th centiles of the absolute and relative errors
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BMC Bioinformatics

ISSN: 1471-2105

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