From: Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
CK | RS | SP | |||
---|---|---|---|---|---|
Method | Area | Method | Area | Method | Area |
NW-linear.b45 | 0.808 | NW-linear.b40 | 0.605 | NW-linear.b62 | 0.509 |
NW-affine.b45 | 0.860 | NW-affine.b40 | 0.614 | NW-affine.b40 | 0.540 |
SW-linear.b45 | 0.850 | SW-linear.b40 | 0.600 | SW-linear.b62 | 0.548 |
SW-affine.b45 | 0.850 | SW-affine.b40 | 0.600 | SW-affine.b62 | 0.548 |
Clustal X | 0.807 | Clustal X | 0.555 | Clustal X | 0.535 |
k-word FPS a | k-word FPS a | k-word FPS a | |||
Method | Area | Method | Area | Method | Area |
cos.1 | 0.729 | cos.1 | 0.609 | cos.1 | 0.569 |
eu.1 | 0.700 | eu.1 | 0.607 | eu.1 | 0.570 |
se.2 | 0.701 | se.1 | 0.500 | se.1 | 0.495 |
W.1.b45 | 0.652 | W.1.b100 | 0.601 | W.1.p120 | 0.559 |
s1.3 | 0.708 | s1.2 | 0.581 | s1.2 | 0.535 |
s2.3 | 0.708 | s2.2 | 0.578 | s2.3 | 0.530 |
gre.3 | 0.673 | gre.1 | 0.607 | gre.1 | 0.572 |
gsm.2 | 0.791 | gsm.1 | 0.594 | gsm.1 | 0.524 |
k-word FPSS b | k-word FPSS b | k-word FPSS b | |||
Method | Area | Method | Area | Method | Area |
cos.3.p120 | 0.655 | cos.1.p40 | 0.604 | cos.1.p40 | 0.571 |
eu.1.p40 | 0.640 | Eu.4.p80 | 0.603 | eu.1.p40 | 0.570 |
se.3.b100 | 0.726 | se.1.p250 | 0.501 | se.2.p250 | 0.545 |
W.1.b45 | 0.652 | W.1.b100 | 0.601 | W.1.b100 | 0.559 |
s1.2.b40 | 0.667 | s1.4.b40 | 0.607 | s1.2.b100 | 0.554 |
s2.2.b40 | 0.667 | s2.4.b40 | 0.607 | s2.3.p40 | 0.545 |
gre.1.p40 | 0.683 | Gre.4.b100 | 0.615 | gre.1.p40 | 0.575 |
gsm.4.b100 | 0.776 | gsm.3.b40 | 0.627 | gsm.2.b100 | 0.557 |