Table 2 Sequence constraints learned by BBNet and GBNet in the five human YY1 clusters. The functional depth for each motif is in parentheses.
Cluster | BBNet | GBNet | ||
|---|---|---|---|---|
| Â | Rules, P-value | Bayesian Score | Rules, P-value | Bayesian Score |
H1 | Presence of YY1 (0.02), 4.05E-12 | -18.14 | Distance between ETS (0.01) and YY1 (0.02):120 bp, 5.32E-13 | -17.23 |
H2 | Presence of YY1 (0.01), 5.43E-10 | -22.64 | Distance between WT1 (0.02) and YY1 (0.01):40 bp, 1.09E-10 | -21.92 |
H3 | Presence of YY1 (0.01), 3.94E-114 Presence of E2F (0.2), 1.54E-33 Presence of ELK1 (0.04), 1.13E-20 | -161.70 | Distance between YY1 (0.01) and E2F (0.01): 40 bp, 1.67E-121 Distance between ELK1 (0.04) and E2F (0.01): 220 bp, 7.64E-26 | -151.71 |
H4 | Presence of YY1 (0.03), 8.64E-6 | -20.56 | Distance between YY1 (0.01) and E2F1 (0.1): 520 bp, 8.82E-9 | -17.71 |
H5 | Presence of YY1 (0.02), 1.90E-6 | -21.39 | Distance between YY1 (0.02) and ELK1 (0.01):160 bp, 9.79E-8 | -19.98 |