Table 2 The Sensitivity(S n ), Specificity(S p ), f-measure(f) and Coverage(Cov)of the predicted clusters generated by IPCA using different parameters
From: Modifying the DPClus algorithm for identifying protein complexes based on new topological structures
Parameter | SP = 2 | ASP = 2 | ||||||
|---|---|---|---|---|---|---|---|---|
| Â | S n | S p | f | Cov | S n | S p | f | Cov |
T in = 0.1 | 0.764 | 0.123 | 0.211 | 0.546 | 0.715 | 0.122 | 0.208 | 0.361 |
T in = 0.2 | 0.822 | 0.140 | 0.239 | 0.579 | 0.763 | 0.134 | 0.228 | 0.398 |
T in = 0.3 | 0.862 | 0.173 | 0.288 | 0.593 | 0.788 | 0.129 | 0.222 | 0.477 |
T in = 0.4 | 0.883 | 0.184 | 0.304 | 0.625 | 0.804 | 0.110 | 0.194 | 0.583 |
T in = 0.5 | 0.864 | 0.106 | 0.189 | 0.727 | 0.864 | 0.106 | 0.189 | 0.727 |
T in = 0.6 | 0.900 | 0.144 | 0.248 | 0.736 | 0.901 | 0.145 | 0.250 | 0.736 |
T in = 0.7 | 0.897 | 0.125 | 0.219 | 0.759 | 0.897 | 0.125 | 0.219 | 0.759 |
T in = 0.8 | 0.895 | 0.119 | 0.210 | 0.764 | 0.895 | 0.119 | 0.210 | 0.764 |
T in = 0.9 | 0.895 | 0.119 | 0.209 | 0.764 | 0.894 | 0.118 | 0.209 | 0.764 |