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Table 2 Highly correlated genes and KEGG pathway

From: Gene and pathway identification with L p penalized Bayesian logistic regression

Genes

Gene Description

Pathway

STXBP1

NM_000909

 

CNTFR

ciliary neurotrophic factor receptor

JAK-STAT SIGNALING PATHWAY

PRL

prolactin

 

SOCS3

suppressor of cytokine signaling 3

 

EPOR

erythropoietin receptor

 

JAK2

janus kinase 2

 

CBL

cas-br-m (murine) ecotropic retroviral transforming sequence

 

IL5RA

interleukin 5 receptor, alpha

 

ESTs

NM_003147

 

SEMA3E

sema domain, immunoglobulin domain, short basic domain, (semaphorin) 3e

AXON GUIDANCE

RASA1

ras p21 protein activator (gtpase activating protein) 1

 

SLIT3

slit homolog 3 (drosophila)

 

SRGAP3

slit-robo rho gtpase activating protein 3

 

EFNA5

ephrin-a5

 

ESTs

Contig38438

 

CLDN14

claudin 14

LEUKOCYTE TRANSENDOTHELIAL MIGRATION

MAPK13

mitogen-activated protein kinase 13

 

CLDN4

claudin 4

 

RAP1B

member of ras oncogene family

 

PTK2B

protein tyrosine kinase 2 beta

 

CDC42

cell division cycle 42

 

MYL6

myosin, light polypeptide 6, smooth muscle and non-muscle

 

VCL

vinculin

 

ESTs + ACTR2

NM_003882 + U79298

 

STMN1

stathmin 1/oncoprotein 18

MAPK SIGNALING PATHWAY

MAPK13

mitogen-activated protein kinase 13

 

MAP2K3

mitogen-activated protein kinase kinase 3

 

NFATC4

nuclear factor of activated t-cells, cytoplasmic, calcineurin-dependent 4

 

CACNA1H

calcium channel, voltage-dependent, alpha 1 h subunit

 

ARRB2

arrestin, beta 2

 

FGFR3

fibroblast growth factor receptor 3

 

ELK4

elk4, ets-domain protein

 

IKBKE

inhibitor of kappa light polypeptide gene enhancer in b-cells, kinase epsilon

 

LOC51241

AF221520

 

VAV2

vav 2 oncogene

T CELL RECEPTOR SIGNALING PATHWAY

IL2

interleukin 2

 

CHUK

conserved helix-loop-helix ubiquitous kinase

 

MALT1

mucosa associated lymphoid tissue lymphoma translocation gene 1

 

CBL

cas-br-m (murine) ecotropic retroviral transforming sequence

 

TCP1

AL080059

 

COX10

cox10 homolog, cytochrome c oxidase assembly protein

OXIDATIVE PHOSPHORYLATION

ATP6V0A2

atpase, h+ transporting, lysosomal v0 subunit a2

 

COX4I1

cytochrome c oxidase subunit iv isoform 1

 

COX6B1

cytochrome c oxidase subunit vib polypeptide 1 (ubiquitous)

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