Skip to main content

Table 4 KEGG pathway and the highly correlated genes

From: Gene and pathway identification with L p penalized Bayesian logistic regression

Genes

Gene Description

Pathway

D26600_at and X59798_at

X06562_at

growth hormone receptor

CYTOKINE-CYTOKINE RECEPTOR

X95095_at

platelet-derived growth factor receptor, alpha polypeptide

 

M12783_at

platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)

 

M20137_at

interleukin 3 (colony-stimulating factor, multiple)

 

L36033_at

chemokine (c-x-c motif) ligand 12 (stromal cell-derived factor 1)

 

V00532_rna1_f_at

interferon, alpha 17

 

U11877_at

interleukin 8 receptor, beta

 

V00542_f_at

interferon, alpha 14

 

D49410_at

interleukin 3 receptor, alpha (low affinity)

 

X04688_at

interleukin 5 (colony-stimulating factor, eosinophil)

 

X02958_at

interferon, alpha 6

 

X00695_s_at

interleukin 2

 

U02687_at

fms-related tyrosine kinase 3

 

M83554_at

tumor necrosis factor receptor superfamily, member 8

 

D43767_at

chemokine (c-c motif) ligand 17

 

X02958_at

interferon, alpha 1

 

U83326_s_at

chemokine (c-c motif) receptor 5

 

X02958_at

interferon, alpha 5

 

M16973_at

M86868_at

gamma-aminobutyric acid (gaba) receptor, rho 2

NEUROACTIVE LIGAND RECEPTOR INTERACTION

U49395_at

purinergic receptor p2x, ligand-gated ion channel, 5

 

U68133_at

cannabinoid receptor 1 (brain)

 

K01911_at

neuropeptide y

 

M31210_at

endothelial di3erentiation, sphingolipid g-protein-coupled receptor, 1

 

D85376_at

thyrotropin-releasing hormone receptor

 

M18185_at

gastric inhibitory polypeptide

 

L27080_at

melanocortin 5 receptor

 

X82068_at

glutamate receptor, ionotrophic, ampa 3

 

M63573_at

U61538_at

calcium binding protein p22

AXON GUIDANCE

M14949_at

related ras viral (r-ras) oncogene homolog

 

L36033_at

chemokine (c-x-c motif) ligand 12 (stromal cell-derived factor 1)

 

X17576_at

nck adaptor protein 1

 

M17219_at

guanine nucleotide binding protein (g protein), alpha inhibiting activity polypeptide 1

 

L41939_at

eph receptor b2

 

X76132_at

deleted in colorectal carcinoma

 

U79294

M92432_at

guanylate cyclase 2d, membrane (retina-specific)

PURINE METABOLISM

U40370_at

phosphodiesterase 1a, calmodulin-dependent

 

Y00971_at

phosphoribosyl pyrophosphate synthetase 1

 

X59618_at

ribonucleotide reductase m2 polypeptide

 

Z46632_at

phosphodiesterase 4c, camp-specific

 

U94586_at

HT3620_s_at

fibroblast growth factor receptor 2

MAPK SIGNALING PATHWAY

M76559_at

calcium channel, voltage-dependent, alpha 2/delta subunit 1

 

M38449_s_at

transforming growth factor, beta 1

 

U66464_at

mitogen-activated protein kinase kinase kinase kinase 1

 

U71087_at

mitogen-activated protein kinase kinase 5

 

U13021_s_at

caspase 2, apoptosis-related cysteine peptidase (neural precursor cell expressed, developmentally down-regulated 2)

 

D12625_at

neurofibromin 1

 

S78187_at

cell division cycle 25b

 

X00274_at

M33600_f_at

major histocompatibility complex, class ii, dr beta 1

ANTIGEN PROCESSING AND PRESENTATION

X00274_at

major histocompatibility complex, class ii, dr alpha

 

X03100_cds2

major histocompatibility complex, class ii, dp alpha 1

 

M13560_s_at

cd74 antigen (invariant polypeptide of major histocompatibility complex, class ii antigen-associated)

 

D45248_at

proteasome (prosome, macropain) activator subunit 2

 

J00105_s_at

beta-2-microglobulin

 

M17236_s_at

major histocompatibility complex, class ii, dq alpha 1

 

HG658-HT658_f_at

major histocompatibility complex, class i, b

 

X69141_at

Y07512_at

protein kinase, cgmp-dependent, type i

GAP JUNCTION

M18255_cds2_s_at

protein kinase c, beta 1

 

Z11695_at

mitogen-activated protein kinase 1

 

X80763_s_at

5-hydroxytryptamine (serotonin) receptor 2c

Â