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Table 1 False Discovery and True Positive Rates for changing mass resolutions

From: LC-MSsim – a simulation software for liquid chromatography mass spectrometry data

FWHM

 

Superhirn

msInspect

OpenMS

MZmine

SpecArray

Decon2LS

0.05

TPR/FDR

0.88/0.57

0.96/0.46

0.92/0.27

0.78/0.87

0.99/0.05

0.80/0.64

0.2

TPR/FDR

0.68/0.50

0.32/0.97

0.96/0.05

0.71/0.83

0.97/0.41

0.82/0.78

0.5

TPR/FDR

0.10/0.72

0.80/0.98

0.95/0.02

0.33/0.68

0.94/0.54

0.68/0.49

0.8

TPR/FDR

0.003/0.50

0.87/0.98

0.84/0.12

0.03/0.31

0.92/0.36

0.49/0.34

  1. False Discovery and True Positive Rates on four data sets with changing mass resolutions.
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BMC Bioinformatics

ISSN: 1471-2105

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