Table 1 Identification of D. melanogaster genes suitable for model reranking
From: Reranking candidate gene models with cross-species comparison for improved gene prediction
D. melanogaster gene loci identified by Evigan-5g | 13,669 |
|---|---|
Genes with multiple Evigan-5g candidate models | 11,701 |
Genes with putative orthologs in D. pseudoobscura | 9,125 |
Intersection (genes with multiple candidate models and putative orthologs) | 7,975 |
Training set (2.5% of intersection, randomly selected) | 1,98 |
Test set (used for Table 2) | 7,777 |
Genes where ReRanker-5g selected the highest probability Evigan-5g model | 6,031 |
Genes where ReRanker-5g selected a lower probability Evigan-5g model (used for Table 3) | 1,746 |